Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01419 ATGGCTGCTACCGCCATGTCCGCCGCCACCACTTACTTCTACGGTACTCGTCTCACCACCAACAATACCGCCTCTTACTCCGGCAAAGTCCAGGCCCTGCTAAAGTTCGGTACCAAGAAGAAGGCCGCCCCGCCTCCGCCGCCCAAAAGAGCGCCGGCCAACACCAAACCATCGGGAGAGCGGCTCGTGTGGCTCCCCGGTGCCCAACCACCGGAATGGCTCGACGGAACCATGGTCGGAGACCGTGGTTTCGATCCATTTGGATTCGCCAAACCCGCCGAGTATTTGCAGTTCGATTTGGACTCGCTGGATCAGAATCTGGCTAAAAATTTGGCCGGAGAAGTGATCGGAACAAGATTCGAGGCCACGGAGGTTAAACCAACGCCGTTCCAGCCGTACACGGAGGTGTTCGGATTGCAGAGATTCCGCGAGTGTGAGCTGATTCATGGAAGGTGGGCAATGCTGGGAGCACTCGGTGCGTTGGCCGTTGAGGCATTTACTGGAGTCGCATGGCAGGACGCTGGAAAGGTAGAGCTGGTGGAAGGGGCATCCTATCTGGGGCTTCCTCTTCCATTCTCATTGACCACACTGATCTGGATCGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAATGCAGAACTTGACCCAGAAAAGAGGTTGTACCCAGGTGGCAAGTTCTTCGATCCCCTCGGCTTGGCCAACGACCCCGAAGAGAAGGCCAGACTTCAACTTGCAGAGCTCAAGCACTCCAGGTTAGCCATGTTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGAAAAGGTCCCATCGCTTTTATTCTTACCTTTAACAAGTGA 849 0.5406 MAATAMSAATTYFYGTRLTTNNTASYSGKVQALLKFGTKKKAAPPPPPKRAPANTKPSGERLVWLPGAQPPEWLDGTMVGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGEVIGTRFEATEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGASYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAELKHSRLAMLVFLIFAIQAAVTGKGPIAFILTFNK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01419 282 Pfam Chlorophyll A-B binding protein 70 266 IPR022796 -
Accr3g01419 282 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 275 IPR001344 GO:0009765|GO:0016020
Accr3g01419 282 MobiDBLite consensus disorder prediction 38 60 - -
Accr3g01419 282 Gene3D Chlorophyll a/b binding protein domain 62 281 - -
Accr3g01419 282 SUPERFAMILY Chlorophyll a-b binding protein 58 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01419 Accr-Chr3 16224108 16226297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01419 15 274 Chloroplast and Mitochondria Gene Families AT3G08940 70.385 1.57e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01419 K08915 - gmx:100794604 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01419 3 16224108 16226297 Accr3g01419 3 16224108 16226297 ECH