Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01418 ATGGCTGCTACCGCCATGTCCGCCGCCACCACTTACTTCTACGGTACTCGTCTCACCACCAACAATACCGCCTCTTACTCCGGCAAAGTCCAGGCCCTGCTAAAGTTCGGTACCAAGAAGAAGGCCGCCCCGCCTCCGCCGCCCAAAAGAGCGCCGGCCAACACCAAACCATCGGGAGAGCGGCTCGTGTGGCTCCCCGGTGCCCAACCACCGGAATGGCTCGACGGAACCATGGTCGGAGACCGTGGTTTCGATCCATTTGGATTCGCCAAACCCGCCGAGTATTTGCAGTTCGATTTGGACTCGCTGGATCAGAATCTGGCTAAAAATTTGGCCGGAGAAGTGATCGGAACAAGATTCGAGGCCACGGAGGTTAAACCAACGCCGTTCCAGCCGTACACGGAGGTGTTCGGATTGCAGAGATTCCGCGAGTGTGAGCTGATTCATGGAAGGTGGGCAATGCTGGGAGCACTCGGTGCGTTGGCCGTTGAGGCATTTACTGGAGTCGCATGGCAGGACGCTGGAAAGGTAGAGCTGGTGGAAGGGGCATCCTATCTGGGGCTTCCTCTTCCATTCTCATTGACCACACTGATCTGGATCGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAATGCAGAACTTGACCCAGAAAAGAGGTTGTACCCAGGTGGCAAGTTCTTCGATCCCCTCGGCTTGGCCAACGACCCCGAAGAGAAGGCCAGACTTCAACTTGCAGAGCTCAAGCACTCCAGGAAACAGTTGAACAATTTTGAGAACTCCAATTATGCTTATACTGAATGTGTGTGTAAGCGACAGAATAAATTAAAGTGA 837 0.5352 MAATAMSAATTYFYGTRLTTNNTASYSGKVQALLKFGTKKKAAPPPPPKRAPANTKPSGERLVWLPGAQPPEWLDGTMVGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGEVIGTRFEATEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGASYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAELKHSRKQLNNFENSNYAYTECVCKRQNKLK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01418 278 Pfam Chlorophyll A-B binding protein 70 253 IPR022796 -
Accr3g01418 278 Gene3D Chlorophyll a/b binding protein domain 62 254 - -
Accr3g01418 278 SUPERFAMILY Chlorophyll a-b binding protein 58 253 - -
Accr3g01418 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 253 IPR001344 GO:0009765|GO:0016020
Accr3g01418 278 MobiDBLite consensus disorder prediction 38 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01418 Accr-Chr3 16224108 16226602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01418 15 259 Chloroplast and Mitochondria Gene Families AT3G08940 68.980 4.58e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01418 K08915 - gmx:100794604 414.461