Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01410 ATGGCGATTAAAGCCAATAGAACGGTGGTTTCGGCTTGTCTTTTCTGGGTTTTCATTCTGTGCGCGACCATAGCATTCTTTCAGCTTAAACTGATAGAGAACGGAAGAGACAATTCATCTGGCCACAAGGCCATCGAAACAGCGCATCAATCTGAAAACCCAGCGGAAGAGGATTTGGAGGGAGTCACTCACAAGGTGTTTTTTGATATAGAGATCGATGGGAAGCTTGCGGGTCGCATAGTCATGGGACTTTTTGGAGCAGTGGTTCCAAAAACTGTAGAAAACTTTCGAGCACTCTGTACCGGAGAGAGAGGCGTAGGAAAAAGCGGGAAGCCTCTTCATTACAAAGGTAGCACATTCCATAGGATAATACCCAGCTTTATGGTCCAAGGGGGTGATTTCACCCGTGGTGATGGACGAGGGGGAGAATCAATCTATGGTTCTAAGTTTGCTGATGAAAACTTCAAAGTGAAGCATAATGGACCAGGATTCTTGTCGATGGCGAATGCTGGAACAGACACAAACGGCTCACAATTTTTTATAACAACAGTCAAAACTAGCTGGTTGGACGGCCGGCATGTTGTATTTGGGAAGGTGCTTTCGGGGATGGACGTTGTCTACAAGATCGAAGCTCAAGGAAGCGCAAATGGCGAGCCCAAAGGCAAGGTTCTTATACTTGACAGTGGGGAATTCACTTCATGA 702 0.463 MAIKANRTVVSACLFWVFILCATIAFFQLKLIENGRDNSSGHKAIETAHQSENPAEEDLEGVTHKVFFDIEIDGKLAGRIVMGLFGAVVPKTVENFRALCTGERGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGSKFADENFKVKHNGPGFLSMANAGTDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVVYKIEAQGSANGEPKGKVLILDSGEFTS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01410 233 CDD cyclophilin_ABH_like 64 229 - -
Accr3g01410 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 67 230 IPR002130 GO:0000413|GO:0003755
Accr3g01410 233 SUPERFAMILY Cyclophilin-like 62 231 IPR029000 -
Accr3g01410 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 68 227 IPR002130 GO:0000413|GO:0003755
Accr3g01410 233 Gene3D - 53 233 IPR029000 -
Accr3g01410 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 230 - -
Accr3g01410 233 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 115 132 IPR020892 GO:0003755|GO:0006457
Accr3g01410 233 FunFam Peptidyl-prolyl cis-trans isomerase 60 232 - -
Accr3g01410 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 163 178 IPR002130 GO:0000413|GO:0003755
Accr3g01410 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Accr3g01410 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Accr3g01410 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Accr3g01410 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 190 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01410 Accr-Chr3 16088400 16091664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01410 78 210 U-box Gene Family AT5G67530 44.776 2.98e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01410 K01802 - gmx:100792649 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01410 3 16088400 16091664 Accr3g01410 3 16088400 16091664 ECH