Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01400 ATGGCCGTCTCCGATGTCGACGCCGTCATCGAGTTCCTGAGGAAGAATGGATTCTCAGAGGCTGAGTCTGCCCTCAAACAGGACATCATCGAAAAACGTGATCTTGGATCCTTTGACTACGAGAAATTCTTCTTTCCTATGGTGCCTCCGCCGCCGCCGATCAGGGTCCGATCCTTTTCCCTGCGGCTCCCCACTGATTGCTCATCGGAAGATGAGTTTGTGAGCTTGAGTTCTTCTACTTCTAATGTTTGTTCTTCTGAATCCATTAATCCATATGGAATCCGTTCATCCTCTCAGAAAAATTCTGAATCTTCATCTGATAGACTATCTCAATTTGGAACCGCACGGGATCACCATTTCGATATGCAAAATGAACAATATTGGTACAACGAGAAAGATGATGACAATTTCATGACTCCAAACTTTGAAGGGCCTGATTTTTTTAGCTCTCCAACTGACAAGTTCATAATGACATCATCAGAAATGGACAATCAACAAGAGAATCCTCAGAATCTTAGTCACATCTCTGAAGGATTTCAATCAGAGGAAAATGGTGATTTTGTAGACAAGACATGCCTTCCCTTTAATGAGAAAGATCAACTCAAAGCAAGATTATTGGAAAAGGAAATTCATCTGAATGATTCTCACTCGAAGGTTGCTGGGAAATTTTCTGGCTATGATTCTTCTGCTTTGGCAAATAGTATGGACCAACACTTTGACTTTTACACGAGCAATGATATTAGTAAAGGGAATAAAGATTCCTATGACTTGACGATTGAAGTTGATGATGAAATCAACAGCAACTTGGAAGATCAAGACGATAAAGCCGAAGAATTTCATGAATCAGATGATGCTGCAGATATCACTGATGATGAGCTGGTAAAGTACATTCCTGAGGATGACTATGAAGTGTTTGACTTAAGAATTATTCATAGAAAAAACAGGACTGGTTTTGAAGAAAGCAAGGATTTTCCGATTGTACTAAATACAGTTATAGCTGGCAGATACTACATAACGGCTTATCTCGGTTCAGCAGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAAACTGGCGTAGATGTTTGCTTGAAGATCATAAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTGTCAATAAACATGACCCAGCTGATCGATTCCACATACTGCGTCTGTATGACTACTTCTATAATCAGGAACATCTATTCATTGTTACTGAGCTTCTGCGAGCGAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGGCGAAGCATATTTTACAATGACGAGGTTGCAGCACATTACTCGTCAATGTTTGGAGGCATTGCAATACTTGCATAATTTAGGGATCATTCACTGTGACCTGAAACCAGAAAACATTCTGATAAAAAATTACAAAAGATGTGAAATCAAGGTCATTGATCTGGGAAGTAGTTGCTTTCAGACAGACAACTTGTGTCTATACGTGCAATCACGATCCTACCGGGCTCCTGAAGTGATACTAGGCCTCCAATATGATGAGAAGATTGATATATGGTCCCTTGGCTGCATCTTAGCCGAACTATGTTATGGCGAGGTTCTCTTTCCAAACGACGGGGTCGTGATGATTCTTGCGCGTATGATTGGAATGCTTGGTCCTTTTGATCTTGAGATGTTGGTCAAAGGACAAGAGACTCACAAGTACTTCACTGAGGAATTTGATATTTATTATGTCAACGAGGAGACAGATCAAGTTGAGTATATAATTCCAGAGGAGTCATCATTGGAGCAGCATTTGGAGGTTACAGACACTCTGTTCATAGACTTTGTAAGATACTTGCTTAGCATAAACCCCAAAACAAGACCTACTGCAACACAGGCTTTGAGACATCCTTGGCTTTCTCATATCTATAAGTCCAAGGACAAGAATTAA 1947 0.3996 MAVSDVDAVIEFLRKNGFSEAESALKQDIIEKRDLGSFDYEKFFFPMVPPPPPIRVRSFSLRLPTDCSSEDEFVSLSSSTSNVCSSESINPYGIRSSSQKNSESSSDRLSQFGTARDHHFDMQNEQYWYNEKDDDNFMTPNFEGPDFFSSPTDKFIMTSSEMDNQQENPQNLSHISEGFQSEENGDFVDKTCLPFNEKDQLKARLLEKEIHLNDSHSKVAGKFSGYDSSALANSMDQHFDFYTSNDISKGNKDSYDLTIEVDDEINSNLEDQDDKAEEFHESDDAADITDDELVKYIPEDDYEVFDLRIIHRKNRTGFEESKDFPIVLNTVIAGRYYITAYLGSAAFSKVVQAHDLQTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADRFHILRLYDYFYNQEHLFIVTELLRANLYEFQKFNQESGGEAYFTMTRLQHITRQCLEALQYLHNLGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVILGLQYDEKIDIWSLGCILAELCYGEVLFPNDGVVMILARMIGMLGPFDLEMLVKGQETHKYFTEEFDIYYVNEETDQVEYIIPEESSLEQHLEVTDTLFIDFVRYLLSINPKTRPTATQALRHPWLSHIYKSKDKN 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01400 648 PANTHER DUAL SPECIFICITY PROTEIN KINASE 96 639 - -
Accr3g01400 648 CDD PKc_DYRK_like 336 638 - -
Accr3g01400 648 MobiDBLite consensus disorder prediction 81 111 - -
Accr3g01400 648 Gene3D Phosphorylase Kinase; domain 1 331 417 - -
Accr3g01400 648 ProSiteProfiles Protein kinase domain profile. 336 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01400 648 FunFam Putative serine/threonine-protein kinase dyrk2 330 417 - -
Accr3g01400 648 Gene3D Transferase(Phosphotransferase) domain 1 390 638 - -
Accr3g01400 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Accr3g01400 648 SUPERFAMILY Protein kinase-like (PK-like) 324 643 IPR011009 -
Accr3g01400 648 SMART serkin_6 336 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01400 648 Pfam Protein kinase domain 340 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01400 648 FunFam Serine/threonine-protein kinase ppk15 415 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01400 Accr-Chr3 15892819 15895958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01400 333 633 MAP Kinase Gene Family AT5G19010 32.399 4.02e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Accr3g01400 Pkinase 9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01400 - - pcin:129298853 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01400 3 15892819 15895958 Accr3g01400 3 15892819 15895958 ECH