Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01386 ATGGAAAATTTCTACTATTCAAGTTCTGGTTCTAGCAGCTGCTGGTGGCCTGTGCAGGCCACAAACAGTAGTAGTAACAACAACAACAATAATAATGTTCCTTCTCCTTTCTCAGTTCATCAGACTCAATTGTTGCCTCACCAAATCTCAGATTCCTGCTCTGTTCAGTTCTGTGATCAGTTTCTTCATCATCCATGGCCTCCTGAAGAAGATAAAGCTTCCAGTGCCTCCAAAAGCCATAGCCAAGCTGAAAAACGCCGTAGGGACAGAATCAATGCCCAGCTTGCCTCTCTCAGAAAACTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAAAGAAAAGCCATGGACATAGGAAAATCCTTCACAGTTCCTACGGAGATCGATGAAGTATTAATAGACCAAGACAATGAAAGCTCAAGCTCGTCATTATCATCAAGCTCTATCATGAACAACAAAGTGAAAGGGAACAACAAGAAGAACATAGTGATAAGAGCTTCTGTGTGCTGCGAGGATCGGCCGGAACTGTTCTCGGAACTCATCAAAGTTCTGAAAGGGCTCAGGCTCACGGCAGTAAAGGCTGACATAGCAAGTGTGGGAGGAAGAATCAAAAGCATCTTGGTGCTCTGTTCTAAGGACAGTGATGATAGTGTTTGTGTTGCTACTCTGAAGCAGTCTCTTAAATCTGCTGTTACTAAAATTGCTGCTTCGTCTTCTTCAATGCCTTCTACTTGTCCTGCAAGAAGCAAGAGGCAGAGGTTTTTCTTGCCTTCCTCTTGCCATCATTGA 828 0.4396 MENFYYSSSGSSSCWWPVQATNSSSNNNNNNNVPSPFSVHQTQLLPHQISDSCSVQFCDQFLHHPWPPEEDKASSASKSHSQAEKRRRDRINAQLASLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGKSFTVPTEIDEVLIDQDNESSSSSLSSSSIMNNKVKGNNKKNIVIRASVCCEDRPELFSELIKVLKGLRLTAVKADIASVGGRIKSILVLCSKDSDDSVCVATLKQSLKSAVTKIAASSSSMPSTCPARSKRQRFFLPSSCHH 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01386 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 127 IPR036638 GO:0046983
Accr3g01386 275 PANTHER TRANSCRIPTION FACTOR BHLH30 37 270 IPR045847 GO:0003700|GO:0006355
Accr3g01386 275 Pfam Helix-loop-helix DNA-binding domain 78 124 IPR011598 GO:0046983
Accr3g01386 275 CDD ACT_UUR-ACR-like 180 215 - -
Accr3g01386 275 SMART finulus 81 130 IPR011598 GO:0046983
Accr3g01386 275 MobiDBLite consensus disorder prediction 68 89 - -
Accr3g01386 275 Gene3D - 69 131 IPR036638 GO:0046983
Accr3g01386 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 124 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01386 Accr-Chr3 15673609 15674652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01386 71 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 46.411 3.43e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr3g01386 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01386 - - gmx:100799687 305.064