Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01385 ATGGGTCTCACCTCAGACAACAACGTCGCTTCCAATAATCGAGTGAAAGGCTCTTGGAGCCCCCAAGAGGACGCCACGCTCATCAAGCTCGTCCACCAGCACGGCCCTCGCAATTGGTCTCTCATCAGTATCGACATACCAGGTCGCTCCGGCAAGTCTTGCAGGCTCCGATGGTGCAATCAGCTTAGCCCCGGCGTTCAACACCGCCCTTTCACTCCCGACGAAGACGCCGTCATCATCCAGGCTCACGCCATCCACGGAAATAAATGGGCCACCATTTCCCGTCTCTTGCCCGGCCGAACGGACAACTCCATCAAGAACCACTGGAACTCCACCCTGCGCCGCCGCCGAGCGGCGCAAATGTCGTCTGCGTCTGGATCGTCGGATTCGGAATCTATTATGGTAATGAAGAAGCGTCTGGAGCCTTGTGATGCCCCGAATTCATCGGAAATGAGGGAGTCGGAGCAGCGATTGAAGAGGCAGTGCCTCGGGAGGATTTCGCCGGGAAACAATAGTTACAGGGATCCAATGGTGGGCCCTGTGAAGACGTCGTTGAGTTTGTTACCTCCAGGAGAGAGAATGGATAACAATGTGAAAGAAGAGAATGAGGAACTCGAAGGTGAAGGGAGTGAGAACGGGAAGCGAAACGAAGAGGAAGAACCGTACCTGATGAGGATGATGAAGCGCGTGATAGCAGAGGAGGTTAGGAATTACATTGATAGTTTGCGGGCCGATAATAAGATCGTTCTCAGAACTGGGCTGGGCTTTCACATGGGCCCATCTTCTTTACCTAAGTAA 798 0.5363 MGLTSDNNVASNNRVKGSWSPQEDATLIKLVHQHGPRNWSLISIDIPGRSGKSCRLRWCNQLSPGVQHRPFTPDEDAVIIQAHAIHGNKWATISRLLPGRTDNSIKNHWNSTLRRRRAAQMSSASGSSDSESIMVMKKRLEPCDAPNSSEMRESEQRLKRQCLGRISPGNNSYRDPMVGPVKTSLSLLPPGERMDNNVKEENEELEGEGSENGKRNEEEEPYLMRMMKRVIAEEVRNYIDSLRADNKIVLRTGLGFHMGPSSLPK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01385 265 Gene3D - 15 67 - -
Accr3g01385 265 PANTHER MYB PROTEIN-RELATED 16 143 - -
Accr3g01385 265 MobiDBLite consensus disorder prediction 1 20 - -
Accr3g01385 265 FunFam MYB transcription factor 16 67 - -
Accr3g01385 265 MobiDBLite consensus disorder prediction 113 132 - -
Accr3g01385 265 Gene3D - 69 157 - -
Accr3g01385 265 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Accr3g01385 265 Pfam Myb-like DNA-binding domain 70 112 IPR001005 -
Accr3g01385 265 Pfam Myb-like DNA-binding domain 16 62 IPR001005 -
Accr3g01385 265 CDD SANT 18 60 IPR001005 -
Accr3g01385 265 SMART sant 67 115 IPR001005 -
Accr3g01385 265 SMART sant 15 64 IPR001005 -
Accr3g01385 265 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Accr3g01385 265 MobiDBLite consensus disorder prediction 200 219 - -
Accr3g01385 265 ProSiteProfiles Myb-like domain profile. 11 62 IPR001005 -
Accr3g01385 265 FunFam Transcription factor MYB44 70 116 - -
Accr3g01385 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Accr3g01385 265 CDD SANT 70 113 IPR001005 -
Accr3g01385 265 MobiDBLite consensus disorder prediction 165 195 - -
Accr3g01385 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 66 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01385 Accr-Chr3 15667504 15668301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01385 14 124 MYB Transcription Factor Family AT4G37260 70.270 4.18e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g01385 Myb_DNA-binding 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01385 - - rcu:8265376 254.603