Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01384 ATGACTAACCAGCAAGATGCTCAGATGTTCAATTGGCACTATACAGAGCTGGATAACCATAACCTCGAACTCCGAAGCAGAAAAGTCTTGTTTATCATCTTTCTTTTCTGTTTGATCCTTCTAATTATTCTTCTCTTCATCTGCGCTCGATGGATCTGCCGTTACCGAGACCACCTTCCGACCAGCTTCCACTCTAGTCAGGTGCGTCACGCAGCGTCTCCGCCGTCGCAGGGTCTCGACCTTGATTCTATCAAGAAATTGCCGATAATCTTGCACCAGGCGCCGTCGGACTCTGATTGCGCATTGGAGGAAACAGAGTGCTGTATTTGCCTCAGCGTGTTCGAAGACGGCGAGAAATTGAAGGTCCTTCCCGGATGCAAACATTGTTTCCACTGTCAGTGTGTCGATAACTGGCTTATTAATCACTCCAGTTGCCCACTCTGCAGAGCTTCTATCAAAGTTGATGTTGATTCTTCTTCGTTTCCAGAGATTTTGATTCAAGAGCCACCGATTAGAATCGACCTTCAATTATAG 534 0.4644 MTNQQDAQMFNWHYTELDNHNLELRSRKVLFIIFLFCLILLIILLFICARWICRYRDHLPTSFHSSQVRHAASPPSQGLDLDSIKKLPIILHQAPSDSDCALEETECCICLSVFEDGEKLKVLPGCKHCFHCQCVDNWLINHSSCPLCRASIKVDVDSSSFPEILIQEPPIRIDLQL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01384 177 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 156 - -
Accr3g01384 177 SUPERFAMILY RING/U-box 100 156 - -
Accr3g01384 177 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Accr3g01384 177 Pfam Ring finger domain 106 149 IPR001841 -
Accr3g01384 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 155 IPR013083 -
Accr3g01384 177 SMART ring_2 107 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01384 Accr-Chr3 15662793 15663326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01384 5 158 C3H Transcription Factor Family AT3G11110 38.961 6.85e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01384 - - gmx:100803278 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01384 3 15662793 15663326 Accr3g01384 3 15662793 15663326 CCT