Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01382 ATGAAGGGGTACGAGCCGCGTTCAAGTTCATCCTGCGCCGCCTGTAAGCTCCTGAAGCGCCGGTGTGCCCCCACCTGCATCTTCGCCCCCTACTTCCGCTCCGACGAGTGCAAGAAATTTGCCAAAGTCCACAAGGTCTTTGGCGCCAGCAATGTCAGCAAGATCCTCTTTGAGGTCCCCGAGGAGCAGCGCGAGGACACCGTCAACTCCCTCGCCTACGAGGCCGATGCCCGCCTCAAAGACCCCGTTTACGGTTGCATTGGCGCCATCGCTCTCTTGCAGACCAAGATGGTTGAGCTCCAGCACGACCTCGCCCTCGCCCGCGCCCGTCTCGCCCGCTATTCTTCCGCCTCCGCTGCCGCAGCCGCTGATGACTCCTTCCTTTCCTTCCCTTCTTCTTCCATTGACAATAGCTTCCTCCCTGCTCACGTGGGTCTGCCTCCTTTCCCTGACTCTTCCTCCTCTTGCTGCGACGTCGACGATGGTTTCTCCTCGTCTCAGGTTCAGTTATCAAGCCGACATGATATGATGGATGATTTTTTCCAAACCCCCTATATATTCTGA 564 0.5762 MKGYEPRSSSSCAACKLLKRRCAPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLALARARLARYSSASAAAAADDSFLSFPSSSIDNSFLPAHVGLPPFPDSSSSCCDVDDGFSSSQVQLSSRHDMMDDFFQTPYIF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01382 187 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Accr3g01382 187 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Accr3g01382 187 Coils Coil 90 110 - -
Accr3g01382 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01382 Accr-Chr3 15589063 15589626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01382 1 126 AS2 family AT3G11090 75.781 5.86e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr3g01382 LOB 3.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01382 - - gmx:100305534 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01382 3 15589063 15589626 Accr3g01382 3 15589063 15589626 ECH