Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01381 ATGAGAAGCAGCATGAAGGGGTACGAGCCGCGTTCAAGTTCATCCTGCGCCGCCTGTAAGCTCCTGAAGCGCCGGTGTGCCCCCACCTGCATCTTCGCCCCCTACTTCCGCTCCGACGAGTGCAAGAAATTTGCCAAAGTCCACAAGGTCTTTGGCGCCAGCAATGTCAGCAAGATCCTCTTTGAGGTCCCCGAGGAGCAGCGCGAGGACACCGTCAACTCCCTCGCCTACGAGGCCGATGCCCGCCTCAAAGACCCCGTTTACGGTTGCATTGGCGCCATCGCTCTCTTGCAGACCAAGATGGTTGAGCTCCAGCACGACCTCGCCCTCGCCCGCGCCCGTCTCGCCCGCTATTCTTCCGCCTCCGCTGCCGCAGCCGCTGATGACTCCTTCCTTTCCTTCCCTTCTTCTTCCATTGACAATAGCTTCCTCCCTGCTCACGTGGGTCTGCCTCCTTTCCCTGACTCTTCCTCCTCTTGCTGCGACGTCGACGATGGTTTCTCCTCGTCTCAGGTTCAGTTATCAAGCCGACATGATATGATGGATGATTTTTTCCAAACCCCCTATATATTCTGA 576 0.5747 MRSSMKGYEPRSSSSCAACKLLKRRCAPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLALARARLARYSSASAAAAADDSFLSFPSSSIDNSFLPAHVGLPPFPDSSSSCCDVDDGFSSSQVQLSSRHDMMDDFFQTPYIF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01381 191 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Accr3g01381 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 141 - -
Accr3g01381 191 Coils Coil 94 114 - -
Accr3g01381 191 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01381 Accr-Chr3 15589051 15589626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01381 5 130 AS2 family AT3G11090 75.781 5.78e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr3g01381 LOB 3.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01381 - - gmx:100305534 241.506