Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01342 ATGTCGCCGGCCGCCGGGGTGCACGTCCCTCTCTTGCCGAAAAGCGAAGCTTCAGTGAAGCCAGCCTCCGTTTCTGGCGCTGTCTTCAATGTAGCTACGAGTATAATTGGCGCCGGAATCATGTCGATTCCGGCGACCATGAAGGTCCTGGGTGTAATCCCGGCCTTCTTCATGATCCTGGTCATCGGCCTCCTTGCCGAAGTTTCAGTGGACTTCCTCATGAGGTTCACGCATTCCGGCGAGACCACCACTTATTCCGGCGTGATGAGGGAGGCCTTCGGGCCTGCCGGAGCACTTGCCGCCCAAATTTGTGTATTGATCACAAATCTTGGGTGTTTAATCATGTACCTCATCATCATCGGGGATGTATTGTCTGGAAATTCACCTGGAGGCGAGGTTCACTTGGGGATTCTGCAACAATGGTTAGGAATTTACTGGTGGACTTCACGGGAATTTGCCCTGCTCGTCATAGTCATACTGACGCTTCCATTGGTCCTGTACCGTCGTGTGGAATCCTTAAGGTTCAGTTCTGCAATATCAACTCTTCTAGCAGTGGCATTCGTGGGCATATGTTCTGGGATGGCAATCACTGCTCTGATCGCCGGAAAAACACATCCTCCAAGATTCCTCCCTCAGTTAGACCGCCACACCTCCTTTTTTGATCTGTTCACGGCTGTTCCAGTCATAGTCACTGCCTTCACCTTTCACTTCAATGTGCATCCGATTGGGTTTGAACTTGCCAAGCCATCTGATATGGCAGTAGCAGTTAGAGTAGCATTAGTTCTATGTGGTGCCATATACTTTTCGATAGGACTATTCGGGTATCTTCTGTTTGGGGATTCAACACAGTCAGACATATTGATCAACTTTGATCAGAACACTTCTGGTTCTTCAACTGGGTCCTTGCTCAACACTCTGGTCCGTTTAAGCTATGCTTCTCACATCATTCTGGTGTTTCCTCTCTTGAACTTCTCTCTTAGAGCCAACATAGATGAGCTCTTGTTCCCCGACAAGCCTGCGCTTGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTTCTCATCTTCTTCAGCTACCTCATGGCCATAGCTCTCCCTGATATTTGGTACTTCTTTCAGTTTTTGGGATCAACCTCTGCAGTGTGCCTCGCCTTCATCTTTCCTGGTTCTCTTGCTCTCAGGGATGCTCATGGTATATCGACCAGAAGAGACAAGATCACAGCACTGATAATGATCATCCTGGCCGTTGTGACAAGTGCGATTGCCATTGCTACCAACATATACAACATTTTTGGTAGCAAGTCATAG 1311 0.4851 MSPAAGVHVPLLPKSEASVKPASVSGAVFNVATSIIGAGIMSIPATMKVLGVIPAFFMILVIGLLAEVSVDFLMRFTHSGETTTYSGVMREAFGPAGALAAQICVLITNLGCLIMYLIIIGDVLSGNSPGGEVHLGILQQWLGIYWWTSREFALLVIVILTLPLVLYRRVESLRFSSAISTLLAVAFVGICSGMAITALIAGKTHPPRFLPQLDRHTSFFDLFTAVPVIVTAFTFHFNVHPIGFELAKPSDMAVAVRVALVLCGAIYFSIGLFGYLLFGDSTQSDILINFDQNTSGSSTGSLLNTLVRLSYASHIILVFPLLNFSLRANIDELLFPDKPALATDNKRFVILTLVLIFFSYLMAIALPDIWYFFQFLGSTSAVCLAFIFPGSLALRDAHGISTRRDKITALIMIILAVVTSAIAIATNIYNIFGSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01342 436 Pfam Transmembrane amino acid transporter protein 21 425 IPR013057 -
Accr3g01342 436 PANTHER AMINO ACID TRANSPORTER 16 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01342 Accr-Chr3 15155635 15157486 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01342 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.310 5.72e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01342 - - qsa:O6P43_020133 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01342 3 15155635 15157486 Accr3g01342 3 15155635 15157486 CCT
Accr3g01342 3 15155635 15157486 Accr3g01342 3 15155635 15157486 ECH