Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01337 ATGGTTTCTAATAAAGACCTCAAGAAGAAGAGAGAAGATCTGCATGAGAAGCTCCAACTCCTTCGTTCTATCACTCACTCTCATTCTCTAGACAAAACATCGATCATATTGGACGCAACAAAGTACATCGAGGAGCTAAAGGAAAAAGTAGAAAGACTGAATCAAGACATAGCCACTGCAGAAGAAACCTCAAAAGACCAAAACCATTTACCTATGGTTACGGTAGAAACCCTAGAAAAGGGATTCCTGATAAATGTATATTCAGGCAACAGTTGCCCAGGCCTGCTAGTTCCCATATTGGAGGTCTTTGAAGATATGGGTCTCAGCGTTATGGAAGCTAGGGTTTCCTGTTCTGACACTTTCCAATTTCAAGCTGTTGGAGGAGAAGAAGAAGAAGGAGGTGATAGCATGGATGCAGAAGCAGTGACACAAGCAGTGAGAAGAGTCATAAAGAATTGGAGAGAGAGTACTAGTCAGCAGTAA 483 0.4203 MVSNKDLKKKREDLHEKLQLLRSITHSHSLDKTSIILDATKYIEELKEKVERLNQDIATAEETSKDQNHLPMVTVETLEKGFLINVYSGNSCPGLLVPILEVFEDMGLSVMEARVSCSDTFQFQAVGGEEEEGGDSMDAEAVTQAVRRVIKNWRESTSQQ 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01337 160 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 59 IPR036638 GO:0046983
Accr3g01337 160 Coils Coil 36 70 - -
Accr3g01337 160 Coils Coil 4 24 - -
Accr3g01337 160 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 155 - -
Accr3g01337 160 Gene3D - 6 71 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01337 Accr-Chr3 15109623 15110876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01337 14 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.081 1.94e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01337 - - tcc:18600910 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01337 3 15109623 15110876 Accr3g01337 3 15109623 15110876 CCT
Accr3g01337 3 15109623 15110876 Accr3g01337 3 15109623 15110876 ECH
Accr7g01755 7 48048107 48049612 Accr3g01337 3 15109623 15110876 ECH
Accr4g01242 4 11966466 11967912 Accr3g01337 3 15109623 15110876 ECH