Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01336 ATGGTTTCTAATAAAGACCTCAAGAAGAAGAGAGAAGATCTGCATGAGAAGCTCCAACTCCTTCGTTCTATCACTCACTCTCATTCTCTAGACAAAACATCGATCATATTGGACGCAACAAAGTACATCGAGGAGCTAAAGGAAAAAGTAGAAAGACTGAATCAAGACATAGCCACTGCAGAAGAAACCTCAAAAGACCAAAACCATTTACCTATGGAAGAAGAAGGAGGTGATAGCATGGATGCAGAAGCAGTGACACAAGCAGTGAGAAGAGTCATAAAGAATTGGAGAGAGAGTACTAGTCAGCAGTAA 312 0.4071 MVSNKDLKKKREDLHEKLQLLRSITHSHSLDKTSIILDATKYIEELKEKVERLNQDIATAEETSKDQNHLPMEEEGGDSMDAEAVTQAVRRVIKNWRESTSQQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01336 103 Coils Coil 36 70 - -
Accr3g01336 103 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 59 IPR036638 GO:0046983
Accr3g01336 103 MobiDBLite consensus disorder prediction 59 82 - -
Accr3g01336 103 Gene3D - 5 71 IPR036638 GO:0046983
Accr3g01336 103 Coils Coil 4 24 - -
Accr3g01336 103 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 72 - -
Accr3g01336 103 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01336 Accr-Chr3 15109623 15110876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01336 8 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 31.818 3.09e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01336 - - jre:108991810 95.1301