Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01328 ATGTCCAGAGAAAGGGAAAATTTTGAAGAGATAGGGAAGAAGATAAAGAGGGAGGGAGATGTATCATCATCACAAATGGGAAGAAGACACATGTTGGGTCCTCCAGGAACCCTAAATACCATAACGCCTTGTGCAGCATGTAAGCTCTTGAGGCGAAGATGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCTCATGAGCCCCAAAAATTTGCTTCTGTTCACAAGGTCTTTGGTGCTAGCAACGTCTCCAAGATGCTCATGGAGGTGCCAGAGAGTCAAAGAGCGGATGCAGCAAATAGTCTAGTGTATGAGGCAAATGTGAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCTGCTTTGCAGCAACAAGTTCAATCTTTACAAGCTGAACTTAATGCTGTAAGGTCTGAAATACTTAAATACAAACTTAGGGAAGCTACTACTAACATCATTCCCTCCTCTCATCATCATCATCATATTCATCATCCTGTCCTCCCTCCTAATTCCTCTCGGGCCGTCTCAATGGCCGCTCCTCCACCGCCACCGCTTCCTCCTCCTCCTCAGCCGCCTCCTTCTCTTCCTTCTGCTTCTGATGATTCCCCTTCTTCCATGTATACCCAAGTCCAGCAGAGGCCTCCCACCAATTATACCACAATTTCATCAAGTGATAATATTTCCTATTTTGGTTAA 705 0.4539 MSRERENFEEIGKKIKREGDVSSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRSEILKYKLREATTNIIPSSHHHHHIHHPVLPPNSSRAVSMAAPPPPPLPPPPQPPPSLPSASDDSPSSMYTQVQQRPPTNYTTISSSDNISYFG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01328 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 39 187 - -
Accr3g01328 234 MobiDBLite consensus disorder prediction 202 234 - -
Accr3g01328 234 Pfam Lateral organ boundaries (LOB) domain 43 140 IPR004883 -
Accr3g01328 234 Coils Coil 122 149 - -
Accr3g01328 234 MobiDBLite consensus disorder prediction 157 234 - -
Accr3g01328 234 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
Accr3g01328 234 MobiDBLite consensus disorder prediction 178 201 - -
Accr3g01328 234 MobiDBLite consensus disorder prediction 1 35 - -
Accr3g01328 234 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01328 Accr-Chr3 15028243 15029377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01328 28 167 AS2 family AT2G40470 87.234 5.94e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr3g01328 LOB 5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01328 - - ccaj:109797870 310.457