Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01301 ATGGCTCGCCTACTGCTGAGCACAGATTCAACCTCAACCCCATCAGGTAATGACAACAGAACAGGTGGCTTTAACACTAGTGATACCAATTTTGACACAAACATGGTGATTATACTAGCGGCCTTGCTCTGTGCACTAATATGTGCTTTAGGGTTAAACTCAATTGTAAGATGTGCTTTGAGATGCAGCAGCAGGTTTGCTTTTGAGACACCAGATGAAGCTGCAGCTCGTGTAGCAGCAAAAGGGTTGAAGAAGAGTGTGTTGCGTCAGATCCCTTTAGTTGTATATGGTTCATCAGGTTCTACTGATATTGGAGCCACTGAGTGTCCAATTTGCCTAGGAGAGTTTGTGGATGGAGAGAAAGTTAGGGTTCTTCCAAAGTGCAACCATGGATTCCATGTTAGCTGCATAGACACATGGCTTCTCTCACATTCTTCTTGCCCTACTTGCAGACAGTCTTTGTATGAACAGCATAGTGCTGCAAGCACTTCCGGTTCTGGGCAAGTATAG 510 0.449 MARLLLSTDSTSTPSGNDNRTGGFNTSDTNFDTNMVIILAALLCALICALGLNSIVRCALRCSSRFAFETPDEAAARVAAKGLKKSVLRQIPLVVYGSSGSTDIGATECPICLGEFVDGEKVRVLPKCNHGFHVSCIDTWLLSHSSCPTCRQSLYEQHSAASTSGSGQV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01301 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
Accr3g01301 169 CDD RING-H2_EL5-like 108 151 - -
Accr3g01301 169 SUPERFAMILY RING/U-box 108 158 - -
Accr3g01301 169 SMART ring_2 109 150 IPR001841 -
Accr3g01301 169 SMART FANCL_C_2 105 157 - -
Accr3g01301 169 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Accr3g01301 169 PANTHER RING-H2 FINGER PROTEIN ATL78 24 163 IPR044602 GO:0016567|GO:0016740
Accr3g01301 169 Pfam Ring finger domain 108 151 IPR001841 -
Accr3g01301 169 FunFam RING-H2 finger protein ATL72-like 74 155 - -
Accr3g01301 169 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01301 Accr-Chr3 14703647 14704156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01301 1 164 C3H Transcription Factor Family AT3G10910 60.116 6.68e-63 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01301 - K19040 qsa:O6P43_020103 244.588