Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01294 ATGGCTTCTTCTTCTTCCTCTTCCTCACCAAATTGGGTCATGGAAAATAATGGAGTCATGCCCCATGTTTTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAAGAATTCTTCTTGCAAAGTGACAACTGCAGAAAATGGACCAAGGGCACTGGAGTTGCTGGGGTTGGCAAGTGATGAAGAAAACACCTTGAAGGGAACTGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTACTCAAGAAAATAAAGAAATCATCAATCATGAAGGAGGTTCCAGTGGTGATCATGTCATCGGAGAACATCCCAACTAGGGTGAACAAGTGTTTGGAGGAAGGTGCTCAGATGTTCATCCAAAAGCCCCTTAAACAATCTGATGTAAAGAAGCTGACATGCCAACTGATGAATTGCAGAGGCTAG 465 0.4344 MASSSSSSSPNWVMENNGVMPHVLAVDDNLIDRKLVEKLLKNSSCKVTTAENGPRALELLGLASDEENTLKGTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01294 154 SMART REC_2 21 146 IPR001789 GO:0000160
Accr3g01294 154 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 149 IPR045279 GO:0009736
Accr3g01294 154 Pfam Response regulator receiver domain 23 144 IPR001789 GO:0000160
Accr3g01294 154 ProSiteProfiles Response regulatory domain profile. 22 150 IPR001789 GO:0000160
Accr3g01294 154 Gene3D - 19 152 - -
Accr3g01294 154 FunFam Two-component response regulator ORR5 21 152 - -
Accr3g01294 154 CDD REC_typeA_ARR 23 145 - -
Accr3g01294 154 SUPERFAMILY CheY-like 20 150 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01294 Accr-Chr3 14605482 14606377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01294 22 153 Response Regulator Gene Family AT3G56380 73.684 4.77e-66 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr3g01294 Response_reg 1.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01294 K14492 - gmx:100499827 241.121