Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01292 ATGGACGATGATGTTACTAGATTGATTCAGAGGGCTTGTGAGTTAGCCAGAAATCTTGAATCGAACTTACACCATATCAGCGAGTCTACCGAATCTGCGGTGAGGTGGATTGATGAGATTGTGATGATACTTAATGCTGTTAAAGGGAAGCTGTTGCCGGCGCCGGTGGTGTCGCAGCCTCGTGAGGACGAAGCGAATAAGCAGGAAATCACACAGCAGCAACACCAGCTTCATCAAGTAATGGCTTCTTCGTTATTGCCACAATGGCTATCTGGGGGTCATCATAGTCAGCTTGCCCCAATGTCTCAGCTTCAAGCTCCAACGAGGAGGACGACGTCGGCACCGCACTTGATGGGTGCGAGCAGAGATGTAGATCCTTCTGCAGAAGCCGATGTTGAAGCATCTCCTTCTCCTCGACGCCGTAAAAGCAGCATCAGGAAGGATGAAGGAGAAAAGAGGACAATAATGGTTCAAGCAGCTCAGTTTGGGAACACAGATGTGCCACCAGAGGATGGCTATACATGGAGAAAATATGGCCAAAAAGAGATCCTAGGATCCAATTTCCCCAGGAGTTACTTCAGGTGCACACACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAACATATTTGCAGTAACATATAGAGGTAGCCACACGTGCCACATGTCCTCCACAGCTCCATCTTCTTCAGTTCCACCACAGCTAATGATCCCACAGGCACAGTCACATGCCACTTCCTCCCAATTGTCTCCTCCTTCCTCTTCAATTCACTGTTGGCTGTCTCCTGTCCACCTCGGCCTCCTTACTGGCGGCAGCAGTGGTGGTGTGAATCCGGCCGGGGCAGAGTCTGGCGGTGGCAGTGCGGGCCCCTCCACATCGAGGTTTGGAGGTGCTGATTACCCGGTGGCAGATATGGCTGATGCCATGTTTAATTCAGGTTCTAGCAGCGGTAATAGCATGGAGTCTCTCTTCGCTTTCGCTGATGACAAAGGGGAAGCAGGAGACAACAAGAAAAGCTAA 1047 0.5014 MDDDVTRLIQRACELARNLESNLHHISESTESAVRWIDEIVMILNAVKGKLLPAPVVSQPREDEANKQEITQQQHQLHQVMASSLLPQWLSGGHHSQLAPMSQLQAPTRRTTSAPHLMGASRDVDPSAEADVEASPSPRRRKSSIRKDEGEKRTIMVQAAQFGNTDVPPEDGYTWRKYGQKEILGSNFPRSYFRCTHQKLYQCPAKKQVQRLDNNPNIFAVTYRGSHTCHMSSTAPSSSVPPQLMIPQAQSHATSSQLSPPSSSIHCWLSPVHLGLLTGGSSGGVNPAGAESGGGSAGPSTSRFGGADYPVADMADAMFNSGSSSGNSMESLFAFADDKGEAGDNKKS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01292 348 ProSiteProfiles WRKY domain profile. 170 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01292 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 242 IPR044810 GO:0003700
Accr3g01292 348 Pfam WRKY DNA -binding domain 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01292 348 SUPERFAMILY WRKY DNA-binding domain 167 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01292 348 MobiDBLite consensus disorder prediction 283 305 - -
Accr3g01292 348 MobiDBLite consensus disorder prediction 126 153 - -
Accr3g01292 348 Gene3D WRKY domain 154 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01292 348 MobiDBLite consensus disorder prediction 96 153 - -
Accr3g01292 348 SMART WRKY_cls 169 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01292 348 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01292 Accr-Chr3 14567761 14570194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01292 3 247 WRKY Transcription Factor Family AT2G40740 41.339 2.42e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g01292 WRKY 5.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01292 - - pcin:129297979 374.785