Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01291 ATGGACGATGATGTTACTAGATTGATTCAGAGGGCTTGTGAGTTAGCCAGAAATCTTGAATCGAACTTACACCATATCAGCGAGTCTACCGAATCTGCGGTGAGGTGGATTGATGAGATTGTGATGATACTTAATGCTGTTAAAGGGAAGCTGTTGCCGGCGCCGGTGGTGTCGCAGCCTCGTGAGGACGAAGCGAATAAGCAGGAAATCACACAGCAGCAACACCAGCTTCATCAAGTAATGGCTTCTTCGTTATTGCCACAATGGCTATCTGGGGGTCATCATAGTCAGCTTGCCCCAATGTCTCAGCTTCAAGCTCCAACGAGGAGGACGACGTCGGCACCGCACTTGATGGGTGCGAGCAGAGATGTAGATCCTTCTGCAGAAGCCGATGTTGAAGCATCTCCTTCTCCTCGACGCCGTAAAAGCATCAGGAAGGATGAAGGAGAAAAGAGGACAATAATGGTTCAAGCAGCTCAGTTTGGGAACACAGATGTGCCACCAGAGGATGGCTATACATGGAGAAAATATGGCCAAAAAGAGATCCTAGGATCCAATTTCCCCAGGAGTTACTTCAGGTGCACACACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAACATATTTGCAGTAACATATAGAGGTAGCCACACGTGCCACATGTCCTCCACAGCTCCATCTTCTTCAGTTCCACCACAGCTAATGATCCCACAGGCACAGTCACATGCCACTTCCTCCCAATTGTCTCCTCCTTCCTCTTCAATTCACTGTTGGCTGTCTCCTGTCCACCTCGGCCTCCTTACTGGCGGCAGCAGTGGTGGTGTGAATCCGGCCGGGGCAGAGTCTGGCGGTGGCAGTGCGGGCCCCTCCACATCGAGGTTTGGAGGTGCTGATTACCCGGTGGCAGATATGGCTGATGCCATGTTTAATTCAGGTTCTAGCAGCGGTAATAGCATGGAGTCTCTCTTCGCTTTCGCTGATGACAAAGGGGAAGCAGGAGACAACAAGAAAAGCTAA 1044 0.501 MDDDVTRLIQRACELARNLESNLHHISESTESAVRWIDEIVMILNAVKGKLLPAPVVSQPREDEANKQEITQQQHQLHQVMASSLLPQWLSGGHHSQLAPMSQLQAPTRRTTSAPHLMGASRDVDPSAEADVEASPSPRRRKSIRKDEGEKRTIMVQAAQFGNTDVPPEDGYTWRKYGQKEILGSNFPRSYFRCTHQKLYQCPAKKQVQRLDNNPNIFAVTYRGSHTCHMSSTAPSSSVPPQLMIPQAQSHATSSQLSPPSSSIHCWLSPVHLGLLTGGSSGGVNPAGAESGGGSAGPSTSRFGGADYPVADMADAMFNSGSSSGNSMESLFAFADDKGEAGDNKKS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01291 347 MobiDBLite consensus disorder prediction 96 152 - -
Accr3g01291 347 SMART WRKY_cls 168 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01291 347 Gene3D WRKY domain 153 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01291 347 Pfam WRKY DNA -binding domain 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01291 347 MobiDBLite consensus disorder prediction 126 152 - -
Accr3g01291 347 SUPERFAMILY WRKY DNA-binding domain 166 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01291 347 ProSiteProfiles WRKY domain profile. 169 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01291 347 MobiDBLite consensus disorder prediction 282 305 - -
Accr3g01291 347 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 241 IPR044810 GO:0003700
Accr3g01291 347 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01291 Accr-Chr3 14567761 14570194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01291 3 246 WRKY Transcription Factor Family AT2G40740 41.502 1.92e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g01291 WRKY 5.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01291 - - pcin:129297979 375.17