Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01290 ATGGCCACTGTTTCCCCAGAGAGCAGCTTGCTCTCCCCCAACAATAGCCGTAACAACAACATAGATAATGTCATCGGAGAGCTCCTCCAGGGTTACCAGTCTGCTTCCGAACTCAAGTTTCTGCTTCAGAAGCCTTTTGACTGCGATGGCCCTCTTTCTGCTCATCAACATTTGGCCATAGTTCTTAGATCTTTCACTTCCTCTCTTTCTCTTCTTACTTCTTCTTCTTCTGATATCGAGGTTGCTCAGAATCTGGTTGTTTCCAGCGAGAATGAGCCGCCGCCGCCTGACTACTTCCTCGACCCGAAGTCACCCGATGCGAGCGAGAGTAGGGGGAGATCGGCGGCGCCGGCCACCAAGAGTCGGAGAGGTTGCTACAAAAGAAGGAGGACTGAGCAAACAAGGACCATAGTCTCTTCCTCTGCGGATGATAATCATGCATGGAGAAAGTACGGACAGAAGGAAATCCTGAATTTCAAATTTCCCAGGAGTTACCTGAGATGCACTCGCAAGTATGAACAAGGTTGTCGGGCGGTGAAGCAGGTGCAGCGGATCCAAGAGAATCCTGAACTGTACCAGATTACGTACATCGGAAATCACACATGTATAGACATCCTTAAGACACCAGACGTAGTGGTCACAGAATCTGGTAATAGCTGGGAATCACTCTTCGCCGCAGAATCGAAGTTTCCAAAGGAAGTAGTAACAAAGGTCCATCCCATAAAACAGGAGCATCATCATAATCATCATCCCAAAGAGGAAACAACGAGTGATGATTTCGCCGACAGCAGCTTGGACCCTAGTTTGTGGTCGGATCTCAAAGACCTCTCCGAGGTTGATGATATTGTGCCTGCTTTGGGGTCTGATAATAATAATGCAGATACTGTGTATTCATGTTCCGGCTCTTTGGATTTCGGGGTCGTCGATGATTCTGTTCATTTTTGCTCCAATGACTTCCACTTCGATGCTTGA 972 0.4784 MATVSPESSLLSPNNSRNNNIDNVIGELLQGYQSASELKFLLQKPFDCDGPLSAHQHLAIVLRSFTSSLSLLTSSSSDIEVAQNLVVSSENEPPPPDYFLDPKSPDASESRGRSAAPATKSRRGCYKRRRTEQTRTIVSSSADDNHAWRKYGQKEILNFKFPRSYLRCTRKYEQGCRAVKQVQRIQENPELYQITYIGNHTCIDILKTPDVVVTESGNSWESLFAAESKFPKEVVTKVHPIKQEHHHNHHPKEETTSDDFADSSLDPSLWSDLKDLSEVDDIVPALGSDNNNADTVYSCSGSLDFGVVDDSVHFCSNDFHFDA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01290 323 Gene3D WRKY domain 121 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01290 323 SMART WRKY_cls 142 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01290 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 253 IPR044810 GO:0003700
Accr3g01290 323 MobiDBLite consensus disorder prediction 242 261 - -
Accr3g01290 323 Pfam WRKY DNA -binding domain 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01290 323 SUPERFAMILY WRKY DNA-binding domain 140 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01290 323 ProSiteProfiles WRKY domain profile. 143 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01290 323 MobiDBLite consensus disorder prediction 88 139 - -
Accr3g01290 323 MobiDBLite consensus disorder prediction 242 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01290 Accr-Chr3 14562217 14564707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01290 24 209 WRKY Transcription Factor Family AT3G56400 41.753 1.77e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g01290 WRKY 3.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01290 - - gmx:100778162 263.077