Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01289 ATGCTTCGAAGTTGGAGCAGGACAACGCCATTTTCGTTGTCCCCTCTGGGGATGTTATCATCATCGGCACCATCGTCTTCGGCTGCCTGTGAAAGTAGACGACCCTCCTTTCTCAGAATCTCTTATTCAAATCCCAGAATCTCACTCCCTCATCCTCCTCCTCTGTCTTCAAACTCTCATACTAGCCTTCGAAGAATGACGCTTTCGACCGCCTGTTTTGGGGCCAGTAGCCCCATTCCCATATCCGGAAAACCCGATTCGGAAAACCTAGAACCCCAATCCGATGATCCTCAGTCGCTTGTGGTGGTGTCCTTTTACAAGTTCGCTGATTTCCCTGACCACGCCAACATGCGGAAACCCTTGAAGGCACTCTGTGAAGAACTGCGCGTTTCAGGTGGTATCATTCTTGCGCCTGAAGGAATCAATGGCAGCATATGTGGTACTCGCGAGTCAGTCGAGAAAGTTCTTGCCTTTATACAAAGTGATAACCGACTTGAGGGTCTAAGACAAGTTGAATCACCTGTGAGTCCTGAGGAAGAAGCTATTCATCTTGGACACAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGATGGGATCATGTGAGGGTTAAGCTGAAGAAAGAGATTGTTACACTTGGGATGCCTTCTGTATCACCTATTGAAAGGGTTGGAAAGTATGTGAGCCCGGGAGAATGGAATTCATTGATCAGTGACCCTGATATGGTGGTGATTGATGTGCGGAACGATTATGAAACCAGAATAGGAAAGTTTAAAGGAGCTGTTGATCCATGTACAGCATCATTTCGTGAATTCCCTTCTTGGGTGGAGGACCATTTTGAGCTTACTGGCGGAAACGATGGCAAGCCTGCAGTAGTCGAGGCAAACAATTCAGGTGAAAGTGTAGAAAATAAAACACAAAATCCTGAACATATGCCTCGAGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAAAAGGCTTCAAGTTTGCTCCTCAGTAAAGGTTTCAAAGAGGTGTATCACTTGGAAGGTGGAATTCTGAAATATCTGGAGGAAGTGCCAAAAACAGAAAGCCTATGGCAGGGTGAGTGCTTTGTGTTTGACAAGCGAGTCTCTGTGGACCATGGTTTGGTGCAAGGAAATTTCAAGCTATGCTATGGTTGCAAGCAGCCTGTGAGTGATGCCGACATTGAAGCTCCTGAATTCGAATATGGAGTTTCTTGCCCACATTGTTTTTCACAGAAATCAGAGGAAGAGAAGGAGAGGGCTCGAGCTCGGCAAAGACAGTTTGAGAGATGGGGAATCATAGGCGGTCCAGATAAAGGTCGCCGACCAACATGTAAACCGGATAGTGGCAATAGGAAATCTGACCAGCTTTCACGTTCAATTTAA 1404 0.4665 MLRSWSRTTPFSLSPLGMLSSSAPSSSAACESRRPSFLRISYSNPRISLPHPPPLSSNSHTSLRRMTLSTACFGASSPIPISGKPDSENLEPQSDDPQSLVVVSFYKFADFPDHANMRKPLKALCEELRVSGGIILAPEGINGSICGTRESVEKVLAFIQSDNRLEGLRQVESPVSPEEEAIHLGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPSVSPIERVGKYVSPGEWNSLISDPDMVVIDVRNDYETRIGKFKGAVDPCTASFREFPSWVEDHFELTGGNDGKPAVVEANNSGESVENKTQNPEHMPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPKTESLWQGECFVFDKRVSVDHGLVQGNFKLCYGCKQPVSDADIEAPEFEYGVSCPHCFSQKSEEEKERARARQRQFERWGIIGGPDKGRRPTCKPDSGNRKSDQLSRSI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01289 467 Pfam Rhodanese-like domain 233 355 IPR001763 -
Accr3g01289 467 Gene3D - 88 214 - -
Accr3g01289 467 CDD RHOD_YceA 228 355 - -
Accr3g01289 467 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Accr3g01289 467 Pfam UPF0176 acylphosphatase like domain 101 213 IPR040503 -
Accr3g01289 467 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 91 431 IPR020936 -
Accr3g01289 467 ProSiteProfiles Rhodanese domain profile. 241 362 IPR001763 -
Accr3g01289 467 Hamap tRNA uridine(34) hydroxylase [trhO]. 98 399 IPR020936 -
Accr3g01289 467 Gene3D - 215 397 IPR036873 -
Accr3g01289 467 SMART rhod_4 231 359 IPR001763 -
Accr3g01289 467 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 210 388 IPR036873 -
Accr3g01289 467 MobiDBLite consensus disorder prediction 423 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01289 Accr-Chr3 14530362 14533795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01289 87 459 Sulfurtransferasese or Rhodanese AT2G40760 77.600 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01289 - - gmx:100784854 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01289 3 14530362 14533795 Accr3g01289 3 14530362 14533795 ECH