Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01270 ATGGAACGAATTACCGTGTGGGTGGACCTACTTTATAAACTATGTACGAAGCAGAAAACACAAAAGGCTGAGGCATCAAGTAGTGATAATGAAAGTGAATTGAGACTAACGGACTTGCTGAAATCACCTGCAGAAGCGCTTAGCACAGGAAAATATGAAAGTCTTTATAAGGTGAAGGTGGACAATTTCAACGGCGGGAAGACAGTGGTTGTGAAAAGGATCAAGAAATTATTGCCCCTTTCCGGCCATGACTTCATAAAAAAAATGAAAACTCTGCGCCAAGCGAAGCACCCTTATGTGCTCTCTCCTCTTGCTTTCTATTGTCAGCGTCCAGAGAAGTATCAGGTTCAAGAGGAGCTTCTGATCTACGAATTCCAGGAAAATGGAAGCTTATTCAAGCTTCTTCAAGGCAAGTCAGAAGGATTTGATTGGAGCAGCAGGCTAGGAATTGCAGCCATGATAGCAGAGGGATTAACTTTCATGCATCAAGAGGTTGGGGAGAAATTAGGTATTGCACATGGAAACTTGAAGTCCTCCAACATTTGGCTGAGCTCTAACATGGAGGCTCGCATAAGCGAGTACGGTTTGATGGACCCGGACGATGATCAACTGAACTCATCATCTTCATCAAGTCCTTCTGGTTCTGAGGCACCAAATGCTTTGAAGGAAGATGTTTATGGCTTTGGAGTAATTCTTCTCGAGCTACTCACAGGGAAGTTGGGGAACATCGATGGGATTGACTTGGCGGAGTGGGTTCAATCTGTTGTAAGGGAAGAATGGACAGGTGAGGTGTTTGACAAGGAACTCATCATATCAGACCCTTCGAATGAAGAGAGGTTGGTGAACCTGCTTCAAGTGGCTATCAAATGTGTCCATTGTTCCCCGGAAGCTAGGCCAAGTATGAATCAGGTGGCTCTCATGATCAACACTATCAGAGAGGAAGAAGAGAAATCTTGA 957 0.4441 MERITVWVDLLYKLCTKQKTQKAEASSSDNESELRLTDLLKSPAEALSTGKYESLYKVKVDNFNGGKTVVVKRIKKLLPLSGHDFIKKMKTLRQAKHPYVLSPLAFYCQRPEKYQVQEELLIYEFQENGSLFKLLQGKSEGFDWSSRLGIAAMIAEGLTFMHQEVGEKLGIAHGNLKSSNIWLSSNMEARISEYGLMDPDDDQLNSSSSSSPSGSEAPNALKEDVYGFGVILLELLTGKLGNIDGIDLAEWVQSVVREEWTGEVFDKELIISDPSNEERLVNLLQVAIKCVHCSPEARPSMNQVALMINTIREEEEKS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01270 318 Pfam Protein tyrosine and serine/threonine kinase 45 305 IPR001245 GO:0004672|GO:0006468
Accr3g01270 318 Gene3D Phosphorylase Kinase; domain 1 31 125 - -
Accr3g01270 318 PANTHER OS05G0588300 PROTEIN 10 313 - -
Accr3g01270 318 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Accr3g01270 318 Gene3D Transferase(Phosphotransferase) domain 1 127 318 - -
Accr3g01270 318 ProSiteProfiles Protein kinase domain profile. 41 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01270 Accr-Chr3 14385597 14387017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01270 36 312 Receptor kinase-like Gene Family AT3G08680 39.731 1.47e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr3g01270 PK_Tyr_Ser-Thr 4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01270 - - aip:107605318 322.783