Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01243 ATGGCTTCCTTTTATTTCATCTTCTTCGTATTTACTCTTCTAGCTTCAATTACAGCACACCCAGTTATTGCTTATTCATCATCCGCCATTAATGTAACCAAACACTTCTACTTCTCCGATTTCACCATAAGCAATAACTCCAGAATCCTCCATGATTTGAAGCTCCTAGGCAGTGCCAAGTTCTCAGAAGAAAACGGCGCTCTTCAAATTCCTGATCAATCCTCAGACATCAGACATCAAGCTGGAAGAGGAATTTACGCTTTCCCGATTCGCCTTCTAGACCCAGAAACTCAGACCCCAGCTTCTTTCCAAACAACTTTCTCTTTTCAGTTCATCAATCACAGCAACTCACAACAAAATAATGATGATTCTTCTTATGGTGGTAGTGGCTTCACTTTCATCATCGTCCCCGACGAGTTCACTGTGGGAAGGTCAGGACCATGGCTAGCCATGCTTAACGATGCTTGTCAAGATAATTACAAAGCAGTGGCCATAGAATTCGACACTAGAATGAACCCAGAATTCGGAGATCCAAATGACAACCACATCGGCATCAATTTAGGTACCATATTATCCTCTAAAACCATTAACGTTTCTGATGTTGGAGTTAACCTTAAGGATGGTTTTGTGCACCGTGCTTGGATTACCTATGATGGTCCTGGAAAAAGAATGGACATTCGTTTAGGATCAGCAAACCAAGAAGATTATTACCCTTCTAAACCAATCTTCTCAGAATCTGTGGATCTCTCTCCTTTTTTAAACGAGTATATGTTTGTGGGATTCTCTGCTTCCACTGGAAACCATACCCAAATCCACAATATTCTTTCATGGAATTTCACTTCCACTTCTCAAGCTTCTCTTCGATTCCCTTCATCTGATACCTGCGAGGGTAAGATCTCACTTCAGAATCCCACTGCAACTCCTAGAACTAAAAATGGTGGTTCTAAATTTGAGCCTTCTCGCAGCTTTTTAATCTTTGTGTCTGTAGTGGCTTTTGTTCTTGCTCTTGTTCTTGGCTTTTATTCATACAGTAAACTCAAAAGGAATGCTGAAAAATCAATCTTTCCAAGCCCCCCAAATAAGCCTCGTCGCTTTACCTTATCTGAGATTTCCTCTGCCACTCGATCCTTCAATGAAATTGATGTTTTGGGTAGTGATTCCAGGGGCGTGTACTACTGTGGGAAGCTTCCTAACGGCGTAAGAGTAGCTGTGAAGAGATTCTCATCTCAGTTTCTGGGCTCATATGGGTCAGATCATAAGAAAAGATTGTTGAAGGAAATCAAATCTATCAGCCAGTTTCGGCACCCGAATTTGACGCCCATAAGAGGGTGGTGCCAAGACAGGCATGAAACAATGGTGGTCTATGACTTCTTCCCAAATGGCAGCCTTGAAAAATGGTTATTCGAGGACAATGTTCTTCCATGGACTCGCCGATTAAAAATCATAAAAGACGTAGCCGATGGATTGTGCTTCCTCCACTCTAAGCAACTAGCCCACAAGAACTTGAAATGTAGCAGTGTGTTTCTTGATGTGAACTACAGAGCAATCTTGGGTGACTTTGGCTTTGTACTATTAGAATCAGAGTCAAGGCAATTCGAGTCCACCGTGTGCCGAGGCGTTGATGTGTTTGAATTTGGTGTGTTGGTTTTGGAAGTGATAGCAGGAAGGCGAAGAGCAGAGGAAGAAGAGAATGTAAAACCAGAAGCAAAGAACTTGTTGGACTATGCTTGGAACTTGCATGAGATTGACGAGAAAGTGAAGGTGCTAGATAGAAGAATGGGATCACTAATAAACTTGGAGCAAGCAAATCGTGTACTTGAAATTGGATTGCTTTGCACATTGAATGAGAACAAAGGAAGGCCAAGTATGGAGCAAGTGATAGGGTTTTTGAACATGGAGATACCCATTCCTAAGCTCCCAACAACTCGCCCTGTTGCATTGTTCCCTTACAGCAGCACCAACGCAGGTCTCTGCAACACCTACTCCTGCACTACCTTGAAGATAAGCAATGACATTAGGGGCGCATTCACTGGGTAG 2037 0.4261 MASFYFIFFVFTLLASITAHPVIAYSSSAINVTKHFYFSDFTISNNSRILHDLKLLGSAKFSEENGALQIPDQSSDIRHQAGRGIYAFPIRLLDPETQTPASFQTTFSFQFINHSNSQQNNDDSSYGGSGFTFIIVPDEFTVGRSGPWLAMLNDACQDNYKAVAIEFDTRMNPEFGDPNDNHIGINLGTILSSKTINVSDVGVNLKDGFVHRAWITYDGPGKRMDIRLGSANQEDYYPSKPIFSESVDLSPFLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQASLRFPSSDTCEGKISLQNPTATPRTKNGGSKFEPSRSFLIFVSVVAFVLALVLGFYSYSKLKRNAEKSIFPSPPNKPRRFTLSEISSATRSFNEIDVLGSDSRGVYYCGKLPNGVRVAVKRFSSQFLGSYGSDHKKRLLKEIKSISQFRHPNLTPIRGWCQDRHETMVVYDFFPNGSLEKWLFEDNVLPWTRRLKIIKDVADGLCFLHSKQLAHKNLKCSSVFLDVNYRAILGDFGFVLLESESRQFESTVCRGVDVFEFGVLVLEVIAGRRRAEEEENVKPEAKNLLDYAWNLHEIDEKVKVLDRRMGSLINLEQANRVLEIGLLCTLNENKGRPSMEQVIGFLNMEIPIPKLPTTRPVALFPYSSTNAGLCNTYSCTTLKISNDIRGAFTG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01243 678 Gene3D Transferase(Phosphotransferase) domain 1 458 651 - -
Accr3g01243 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 283 IPR013320 -
Accr3g01243 678 Pfam Protein tyrosine and serine/threonine kinase 383 526 IPR001245 GO:0004672|GO:0006468
Accr3g01243 678 CDD lectin_legume_LecRK_Arcelin_ConA 41 282 IPR001220 GO:0030246
Accr3g01243 678 ProSiteProfiles Protein kinase domain profile. 377 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01243 678 Gene3D Phosphorylase Kinase; domain 1 340 457 - -
Accr3g01243 678 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 33 289 - -
Accr3g01243 678 Pfam Legume lectin domain 35 285 IPR001220 GO:0030246
Accr3g01243 678 Gene3D - 33 286 - -
Accr3g01243 678 PANTHER - 65 634 - -
Accr3g01243 678 SUPERFAMILY Protein kinase-like (PK-like) 351 630 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01243 Accr-Chr3 14066112 14068148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01243 6 642 Receptor kinase-like Gene Family AT5G55830 31.633 6.02e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr3g01243 Lectin_legB 2.4e-54 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01243 - - gmx:100781464 965.296