Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01239 ATGGGTGCGGCTACTAACTGTCATCCACCGCCGCCGCCGAGTGCGGATGAGACGGCGGTTTTACCTCTGAATTCGCTGCCTCTGGGTTTCAGATTTCGGCCCACCGACGAGGAGCTTGTTGATTATTACCTGAGACAGAAGATTAACGGTTTTGGCCACGACGTCTGGGTTATTCGGGAAATCGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCTCAGGACCGCAAGTACCCGAATGGCCATAGATTGAACCGAGCAACAAATCAAGGGTATTGGAAAGCAACTGGCAAGGATCGGAGAATCAAGTCTGGTCCCAACTTGATAGGAATGAAGAAGACTTTGGTCTTCTATAGTGGTCGTGCTCCCAGGGGGAAGAGGACCCATTGGGTTATGCATGAGTACCGTCCTACTCTTAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCCTATGTCCTCTGTCGTTTGTTTAGGAAACAAGATGAAACTCTTGAAGCTGATGAAACTGAACGAACCGCGTCAACTCCTACTGCTGCTAATTACTCCCCAGAAGAAATACAGTCTGATGCAGGTATGGCTGTGGTATCCCCATCGCCAGCTCCAGAAGATGACAAGCGGCAGATTGTTCCATTCTGTATTTCTGAGAACACTGAAGAAACGACATCTAACGTAATAACATCAGCTGATTGCCATAGTGATGGGGGTGATGCTTCCTGTGCACAAAATCAAAATGTAGATAAAACAGCTTGGGAGGAGGATCCACTGGCAAGCCTTGATGATATATTTAATGAACCAATAACTGGGCCATTTGATGACAAGATGTTCTCCCCATTACATGTGTCAGAATTTTATGATCCAGTGTGCAACGAGTCAGATAGTCAATGTGGGCTGCAACTTCCATTTGGCACAAATGAGACAAATATTTCAGACTTCTTAGACGCATACAATAATTGTGGTGAATTGTCCTGTGGGGATTACATCAGTCAGAAGCCAACCTCTGGCATTTTAAATCCTTGGGACAATGGATCTGGCAGTGTCTCAGATGGGCAAATGGCCAATATGCTGTATTGGCAAGCGTTGCTTGCTGCGCATCCTGAGGAGCAAATTGACAAGAGGATTCCTTCCATGATAGATACAGCTTCAGAATTTAACAGAACCATTACCTGTGACCTGAGCGGTTATGAGCAGAAAAGCAATGTGGGGATATTCCAAGGCCATCCTCAGATGGCATCTAATGTTGCTTTTGACCCAGAGTCTGGTGTATCAAATAGTTGTCAAGAACCAAGTAACTACAATACAGTTGTTGGCGGCGATAATAGTACCGGGATCAGGATTAGGACTCGCCCAGTGCGAAATGAACAGGTAAACACGTACCCTATGAACCAAGGACAAGGTACTGCTCCAAGAAGAATATTTCTACACGTACACAAATTACCACCTGGCTCCAATAAAGTTGAGGAAGATGGGAGATGTGCTCAAGATGACCTCGACTCAAAACCAATTATCACAGGGGAGACTAAAGCCTCAGAAAACGATGGTGCTGAAGAGGATGCTACTAGTACTGAGGCTGGGAGTGAGCCTTCGACTCCCGAGTCAGTTGACAGTAACAAGATTTCTGAACCACTTGTTACAAATGAAGATGCTCTCTCTGGTTTAGAAGAGACCTTGTTGTGCAAATCAGCTTCTTCTCGTGGGGCGACAATCTGGTCATCTAAAGTGGTACTCTCTGTCGGTTTAATGGCCGCAGTAGTATTCATGGCTAATATATGGGGAATTCTGAAATTTTGA 1839 0.4573 MGAATNCHPPPPPSADETAVLPLNSLPLGFRFRPTDEELVDYYLRQKINGFGHDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNQGYWKATGKDRRIKSGPNLIGMKKTLVFYSGRAPRGKRTHWVMHEYRPTLKELDGTNPGQNAYVLCRLFRKQDETLEADETERTASTPTAANYSPEEIQSDAGMAVVSPSPAPEDDKRQIVPFCISENTEETTSNVITSADCHSDGGDASCAQNQNVDKTAWEEDPLASLDDIFNEPITGPFDDKMFSPLHVSEFYDPVCNESDSQCGLQLPFGTNETNISDFLDAYNNCGELSCGDYISQKPTSGILNPWDNGSGSVSDGQMANMLYWQALLAAHPEEQIDKRIPSMIDTASEFNRTITCDLSGYEQKSNVGIFQGHPQMASNVAFDPESGVSNSCQEPSNYNTVVGGDNSTGIRIRTRPVRNEQVNTYPMNQGQGTAPRRIFLHVHKLPPGSNKVEEDGRCAQDDLDSKPIITGETKASENDGAEEDATSTEAGSEPSTPESVDSNKISEPLVTNEDALSGLEETLLCKSASSRGATIWSSKVVLSVGLMAAVVFMANIWGILKF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01239 612 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 235 - -
Accr3g01239 612 ProSiteProfiles NAC domain profile. 26 176 IPR003441 GO:0003677|GO:0006355
Accr3g01239 612 MobiDBLite consensus disorder prediction 496 558 - -
Accr3g01239 612 MobiDBLite consensus disorder prediction 538 558 - -
Accr3g01239 612 Gene3D NAC domain 35 181 IPR036093 GO:0003677|GO:0006355
Accr3g01239 612 SUPERFAMILY NAC domain 20 176 IPR036093 GO:0003677|GO:0006355
Accr3g01239 612 FunFam Nac domain-containing protein 86 35 179 - -
Accr3g01239 612 MobiDBLite consensus disorder prediction 497 512 - -
Accr3g01239 612 MobiDBLite consensus disorder prediction 434 459 - -
Accr3g01239 612 Pfam No apical meristem (NAM) protein 27 152 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01239 Accr-Chr3 13992499 13995475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01239 19 493 NAC Transcription Factor Family AT4G35580 41.201 1.98e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr3g01239 NAM 7.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01239 - - gmx:100778903 595.119