Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01222 ATGGGCGAGATCATGTTGAGTACTGGGAAGGTTCTGGAAGCGACGGAGGTAGGGGCCGAGAACCATAAGCATAGGGCGACGGCGGAGGAGGAAGAGGGTGTAACAGAGAGTAAGGATGAGGAATTGAATAATGGATTGATGCGGTGGAAGAATTTCTTGCCCAAAATGACATTGAGGGTGTTGTTGGCTGAAGCTGATGATTCTACGCGGCAGATTATAGCCGCGCTTCTCAGGAAATGCAGCTACAGAGTGGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATATTGAAGGGAAGACCACACAATGTTGATCTCATATTAACTGAAGTAGATTTGCCATCAATATCTGGTTATAGTCTTCTCACATTAATTACGGAGCATGAAGTTTGCAAAAACATTCCTGTTATAATGATGTCTTCGCAAGATTCAATCAACACAGTCTACAAATGCATGCTGAGAGGTGCAGCTGACTACCTTGTTAAGCCCCTTAGAAAAAACGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGGTGTAAATGGTCTTGAAGACGAGAGTGTTGCACAACTGAAGGCTGAAGCCACTGCCGAAAACAATGCCCCGGACAATCATTCAAGTGGTGATGCTGCATGCATTCAAAGAAATAAGGAGTTAATTGAGAAAGGAAGTGATGCTCAGAGCTCTTGTGGTGCAAAACCTGATTTGGAAGCTGAAAGTGCTCCGACAGATCATGTGTATGAATCTTCCCAACGAAAGCGTGTTGAACCGTGCCCAAGAGAAACAAAGATGCAGGAGGTAGAAATGTCCATTCAAGTAGGCCAGACCTTGACAGTGCATGACAATCACCCCGGAGGATTAACAGTTGAGATCCGAAAAAATGGTGGTGAAACTAATTCAGCATATGGCAAGGATGGTGACCAAGATCATTTTAGGACTCCTGACGGCAGTCGGGAGGCTTATGACAACCATAATGTTCAAATTACCTCTTCAAAGGAAGCTATCGACTTGATTGGAGCATTTCAAAATCATCCAAATAACTGTCACAGGAGTTCCTCAGTCAACTGCACGGGCACATTTGACTTTTCCCCCCAGCTGGATCTTTCCTTGAGAAGATCTCATCCCAGCAGCTTTGAGAATGCTATTAAAGAAAGACATGCCCTGATGCATTCTAGTGGCTCAGCTTTCAGGCGGTATGCAAATAGGCAAACACAAGCACCGCCTGCAGAGTCCATAAACTGCTGCGATCAACAGAGAGAAAACAGAACAAATTGTGAGAACAATATCTCGAACATTGTAGGCTATAACTCAGACATTTCAATGCCTAATTTGCAAGGAAGTATTGGTTCTTCAGCTGCACCGCAGTTGAAAGAATCTGAGCTCACAACTTCACCCTCGCAGTGTAGACTTTCACATCCAATCCCAGTAAAAGCTGTAAGGTACGATAATCCATGCACAGCCTATGCTTCTGTACTTCCTCCTATGTTATGTACGCGGTCAGGCCCCGCATCAACACTACTAAATCCAGACTCAATGCCACATCGTGAACCAACCTTTCAAGTGAATGGTTTTTATCAGTCAAATACCAGAGAAAGCAGCTCAGACCAGCTTTATGAACCTCAAGCTCAAAATGGAAACAACACAACAAACCACATTGTGTATATGCAGGAAGGCAATTTGGAACATGTGGAGGATCGAAGAAGACACATCTCTCCCACGACTGGTCAAAGTGCCTGCATTAACAGCAATGCTGATCAGGTTGCTATAGCCAGGGCAGCTTCAGAGAGCATGACTGAAGACCTCACAAATTATACTAGTTCTCATCGATCTATCCAAAGAGAAGCAGCTCTAAACAAATTCCGCTTGAAACGGAAAGAGAGATGCTTTGAAAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGCCCTAGAGTGAAGGGACAATTTGTTCGCCAAGTGCAGCAAGATTCCTAG 2001 0.4463 MGEIMLSTGKVLEATEVGAENHKHRATAEEEEGVTESKDEELNNGLMRWKNFLPKMTLRVLLAEADDSTRQIIAALLRKCSYRVAAVADGLKAWEILKGRPHNVDLILTEVDLPSISGYSLLTLITEHEVCKNIPVIMMSSQDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGVNGLEDESVAQLKAEATAENNAPDNHSSGDAACIQRNKELIEKGSDAQSSCGAKPDLEAESAPTDHVYESSQRKRVEPCPRETKMQEVEMSIQVGQTLTVHDNHPGGLTVEIRKNGGETNSAYGKDGDQDHFRTPDGSREAYDNHNVQITSSKEAIDLIGAFQNHPNNCHRSSSVNCTGTFDFSPQLDLSLRRSHPSSFENAIKERHALMHSSGSAFRRYANRQTQAPPAESINCCDQQRENRTNCENNISNIVGYNSDISMPNLQGSIGSSAAPQLKESELTTSPSQCRLSHPIPVKAVRYDNPCTAYASVLPPMLCTRSGPASTLLNPDSMPHREPTFQVNGFYQSNTRESSSDQLYEPQAQNGNNTTNHIVYMQEGNLEHVEDRRRHISPTTGQSACINSNADQVAIARAASESMTEDLTNYTSSHRSIQREAALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRQVQQDS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01222 666 SUPERFAMILY CheY-like 51 184 IPR011006 -
Accr3g01222 666 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Accr3g01222 666 MobiDBLite consensus disorder prediction 229 268 - -
Accr3g01222 666 ProSiteProfiles CCT domain profile. 619 661 IPR010402 GO:0005515
Accr3g01222 666 MobiDBLite consensus disorder prediction 16 40 - -
Accr3g01222 666 Gene3D - 56 266 - -
Accr3g01222 666 CDD psREC_PRR 60 163 - -
Accr3g01222 666 MobiDBLite consensus disorder prediction 645 666 - -
Accr3g01222 666 MobiDBLite consensus disorder prediction 244 268 - -
Accr3g01222 666 Pfam CCT motif 619 661 IPR010402 GO:0005515
Accr3g01222 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 269 IPR045279 GO:0009736
Accr3g01222 666 SMART REC_2 58 173 IPR001789 GO:0000160
Accr3g01222 666 Pfam Response regulator receiver domain 60 171 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01222 Accr-Chr3 13767709 13771642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01222 339 663 Response Regulator Gene Family AT5G24470 34.226 9.62e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr3g01222 Response_reg 1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01222 K12130 - gmx:100777119 771.926