Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01210 ATGTCACAGCAGAGGCAGAATAATAATAATCGCATGATGATGATGAGTGCGAGTAATGCAAAACAAGTTGGTGACACAACTTATACAAAGATCTTCGTGGGAGGCTTGGCTTGGGAGACAAAAAGAGACTCTCTCAAACGCTATTTTGAGCAGTTTGGAGAAATCTCAGAGGCTGTTGTTATCACTGACAGAAACACTGGAGCATCCAAAGGCTATGGCTTTGTGACTTTTAAGGATCCTGAATCTGCAATGAGAGCTTGTCAGAATCCCTATCCTTTGATCGATGCGAGGAGGGCTAATTGTAATCTTGCTGTTCTTGGTGCTCGCAAATTCAACCCATCATCCACCACAGGAGGAGCTGAGAAATTTAACACCAATTCATGGGCTATGGTACCAGTCCCAGTTCAAGGTTCTTCTTCATATTACCATCAGCACATACCTCATTACACTTTTCCCTTTCCACCACCCTATAGGTATCCTCCTGCTTATCCTCCCTCACAAGAAATCTATGCAATGAACTACTATAATGTTTATGGAGGGAATCAGGTTCCATTTCGATGGCGTCCAGCAACATACCAACCATTTTATGGGCAAAGTAATTCAATGAGATTGCCAGCAGAATCCACAATAATGGGGAAGAAGCCACACTACTCTGATATCCCACCAGAACCTATTTCAGTTTCTCCTTCAATACCCACCTCTGGACTGGTCACAGGGACAGTTTCTTCTGCAGCAGCAGCCAAGGTAGGAGCATCATCCCCTGAACACAAATCTTCAGCTTAG 783 0.4393 MSQQRQNNNNRMMMMSASNAKQVGDTTYTKIFVGGLAWETKRDSLKRYFEQFGEISEAVVITDRNTGASKGYGFVTFKDPESAMRACQNPYPLIDARRANCNLAVLGARKFNPSSTTGGAEKFNTNSWAMVPVPVQGSSSYYHQHIPHYTFPFPPPYRYPPAYPPSQEIYAMNYYNVYGGNQVPFRWRPATYQPFYGQSNSMRLPAESTIMGKKPHYSDIPPEPISVSPSIPTSGLVTGTVSSAAAAKVGASSPEHKSSA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01210 260 SUPERFAMILY RNA-binding domain, RBD 28 116 IPR035979 GO:0003676
Accr3g01210 260 Gene3D - 1 121 IPR012677 -
Accr3g01210 260 CDD RRM_RBM24_RBM38_like 29 104 - -
Accr3g01210 260 SMART rrm1_1 30 102 IPR000504 GO:0003723
Accr3g01210 260 PANTHER BOULE-RELATED 14 220 - -
Accr3g01210 260 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 88 IPR000504 GO:0003723
Accr3g01210 260 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 110 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01210 Accr-Chr3 13698405 13699669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01210 25 104 C2H2 Transcription Factor Family AT2G19380 43.750 1.57e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01210 - - adu:107469851 276.174