Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01202 ATGGGGAAGGTAGGAACAAGCTCTTGGCTGACTGCAGTGAAAAGGGCTTTCAGGTCCCCAACAAAAGAAAACGATAAGAGAAGCAGTAGCAGGAGAAGAGAAGAACCAGAACAAGAAGAGGAGGAGGAAAAGAAGAGGGGAAAACGAAGATGGATTTTTAGGAAGGCGTTGGGTCAAGAAACAGTAGAAGCAACTCGTCAGCTTTCTGAGGAAAGAACTATAACCACTGTTGCTGATATTGCTGCAGCAAGTAGTAATGTGTCTGAGGTAGTTGATTCTGATCCTCAAGGACACACCATTGCAGTAGCCATGGCAACTACAGCGGCAGCTCAGGCAGCAGTGGCATCTGCTCAGGCGGCCGTGGAAGCTGTTCGGCTGGCAAGGCCGTCCATCTTTGTCAGACGCCATTATGCTGCCACCACTATTCAAACAGCCTTCAGAGGTTATCTGGCAAGAAGAGCACTAAGGGCACTTAAAGGACTAGTGAAGCTGCAGGCATTAGTGAGAGGTCATAATGTCAGAAAAAGAGCAAAATTTACTCTTCAGTGTATGCAAGCTCTTGTTCGAGTTCAAACTCGGCTATGTGAACAGCGAGCTAAGAAGATTTCTCGACATGGAAGCTCTGGTTCTAGACTAAGTGATTCCTCTAATACATGGGTGTCACATTTAACTGACATCAAGTCCATTTACTGTAGAGATGATGAAGTACAAACCATTGACAAGATTCGAGCTTCTCTAAAGAAAACCAAGGAAGTTGCCTTGAAACGAGAAGATGACCTGGCTGATGCTTTCTCTCAACAGATATGGAGAACTTGCGGGGACCCCAGTGCCAGTGAGGGTGAGGCAGAGGAAATCTCTAGATGGTCTGAGCCATGGATTCGAACAGGAAGAAGAAAAAGCTTGAACAGAGATCAAAACACAGGTAGATCCTCGTGTGATCAAAGAGACCATATCAAAATAGTTGAAATAGACACTTTTAGACCTTACTCAAACGCATCTTGTGGATACAACTACAAGCCTCAGTTCAATTCTCCACTTAGAAGCCATACACTTGCTTTGTCTTCACCAATGCACAAAGCCCACTGTGAGGCCTCTTTGCAGCCCCAAATAGTGACACCATCACCTAGAAAGATGAAGCAGAATCTTCTTCAGGCACATTCATCATCAGCTAGTCCTCGTTGCACCACCACCAAGCCCATATATTCAGTGCATGATGTTTCAGTGCCTAACTATATGGCTGCCACTGCTTCTGCTAAGGCTCGGCTTCGCTCAATGAGTGCACCAAGGCAGAGGACTTCAAGCCCACAAAAGTAG 1314 0.4589 MGKVGTSSWLTAVKRAFRSPTKENDKRSSSRRREEPEQEEEEEKKRGKRRWIFRKALGQETVEATRQLSEERTITTVADIAAASSNVSEVVDSDPQGHTIAVAMATTAAAQAAVASAQAAVEAVRLARPSIFVRRHYAATTIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKRAKFTLQCMQALVRVQTRLCEQRAKKISRHGSSGSRLSDSSNTWVSHLTDIKSIYCRDDEVQTIDKIRASLKKTKEVALKREDDLADAFSQQIWRTCGDPSASEGEAEEISRWSEPWIRTGRRKSLNRDQNTGRSSCDQRDHIKIVEIDTFRPYSNASCGYNYKPQFNSPLRSHTLALSSPMHKAHCEASLQPQIVTPSPRKMKQNLLQAHSSSASPRCTTTKPIYSVHDVSVPNYMAATASAKARLRSMSAPRQRTSSPQK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01202 437 Pfam Protein of unknown function (DUF4005) 374 437 IPR025064 -
Accr3g01202 437 Gene3D - 133 187 - -
Accr3g01202 437 MobiDBLite consensus disorder prediction 1 47 - -
Accr3g01202 437 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Accr3g01202 437 MobiDBLite consensus disorder prediction 18 47 - -
Accr3g01202 437 PANTHER IQ-DOMAIN 5-RELATED 1 434 - -
Accr3g01202 437 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Accr3g01202 437 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Accr3g01202 437 Pfam IQ calmodulin-binding motif 138 156 IPR000048 GO:0005515
Accr3g01202 437 SMART iq_5 134 156 IPR000048 GO:0005515
Accr3g01202 437 SMART iq_5 157 178 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01202 Accr-Chr3 13525926 13527616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01202 1 437 IQD Protein Family AT1G01110 40.644 4.61e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01202 - - pcin:129295891 552.747