Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01200 ATGGAGTCACTTTCACTCATTTGTCTGCTAGTGTGTGGTGCGAATGTTGGAAGCATGGAAGCAAAGCAAAGGCCGAGAATGGCGGCAACCCCATCCCTCTATCATCCTAAATCCCCACCTCAGCCTTCTTCCAACCACTATCAATACCAGAGAGAGAAAGAGGGAGAGAGAGAGATGATGCAGAAGATGGTGCCTCATAATCACCACCACCGTCCATTATCGCCATTTGTTAACGATTCCTGTGCTGGGGGTGGTGGTGATGGCGATGGTCCCACCACGATCTGTTCTGTTTCTACTACTTTGTATAATAATATGACTCATTATCATCAACATCATCGTAATAATATAAACGATCTTGTTAGTGGATCTTCTGTTTCTCCTGCTGCTGTTGCTGCAGCAGCTATTCATAGTGGGGGTGCTGCTGTAAGAACTTTGCAGCCTTTTGACATTTCCTCTTCCCCTGCCTTCAAATCCCCAGGGGCGATGGCGGCTTCGTTAGGATTCCCTTTCACAAATGCTCAATGGAAGGAGCTTGAAAGGCAAGCTATGATTTACAAGTACATGATGGCCTCTGTTCCTGTTCCTCCTAATCTCCTAATCCCCACTGCTCTCGCCTCTGCTTCTTGCTCTCCCTTTGATGGTGGTTTTAATCTGAGGCTGTCAAGTAGCAGCACTGATCCAGAGCCAGGGAGGTGCCGGAGAACTGATGGGAAAAAATGGAGGTGTTCTAGAGATGTGGCTCCTAACCACAAGTACTGTGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCAAACAGACGGCGGCGCCACCACCGACAAAAACAACAACCAGCAAAACAAAAGGGCTCGCCAAGATTTTCATCATCCTTATCCTGCATCTGCAGTTACTGTGGCTGTTTCTGGTCCCACCATTACGAATGGTGGATCTTCTTCTCAGTTTCTTCAGTCTACTACTAGTGGTCAGACATTTCATGAATCTTCCCTTTCTCTTGACAAGTATGGTGTCAAAGCTGCTAATTTTGGATCTTTGGCTTCCGTGCCATATGATAGCCAACCAAGGGGCTTGGACTGGTTGCTGAAGGGAGATCCCATTTCCATGGCTGCTTCAGATCAAGAATGGCAGCCTCTGATGCAAGCTAAGGCTGATCTGATTACACAGAGTCCCTGCAACAACAATAACAATGCCACCATTTCAAGTTACGAAGACGTTCTGTATCTGAGTTCCTATGCGTCTTTCAACTCAGGACTGGACCAACAAAACAGACGTTGCTCTCTGTTCCTTAATCCTCTCCTTCCCTTGGAGAATCCAGAGTCCCTAAAACCCAGAGGATTCATTGATGCTTGGTCTAATGCAGAAACAGTGGAAAACAACAATGGCAACACCAGAAAAAGCCCTGTTTCCTCAAATGCTAAACTGTCCCTTTCTTCTCTTGATTTATCAATGGGTGGTGGCTCTGTGGGGGGTGAAGAAATGGGTTCTATTCACATGGGTTTAGGCCTAATGGTGTCTGATGGTGACACAGAAAATGGCCACAAAACCCATCTTTCTAATTGGCTCACTGCTGCTGCACCGTGGGCTGGTTCAACAACACCTGGGGGTCCCCTGGCCGAGGTTCTTAGGCCAAGCGCGGTGGCTCTGGCCACCGAGGCCACCTCCAATCCGCCGTCTCCGGTGCTAGCAAATGCCGAATCTGGCAGTCCCCTGGCAACCATGGTGTCATCTCCATCTGGGGTTTTGCAGAAAACACTGGGATCCACGTCTGATTGTAGTAGCAATAGTAGCCCAACAGTTGCATCTTCAAGGGCCAATTCTGAGTTTACCTTTCTTTTGTTCAATAAAGCAAATTAG 1869 0.4789 MESLSLICLLVCGANVGSMEAKQRPRMAATPSLYHPKSPPQPSSNHYQYQREKEGEREMMQKMVPHNHHHRPLSPFVNDSCAGGGGDGDGPTTICSVSTTLYNNMTHYHQHHRNNINDLVSGSSVSPAAVAAAAIHSGGAAVRTLQPFDISSSPAFKSPGAMAASLGFPFTNAQWKELERQAMIYKYMMASVPVPPNLLIPTALASASCSPFDGGFNLRLSSSSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVQTDGGATTDKNNNQQNKRARQDFHHPYPASAVTVAVSGPTITNGGSSSQFLQSTTSGQTFHESSLSLDKYGVKAANFGSLASVPYDSQPRGLDWLLKGDPISMAASDQEWQPLMQAKADLITQSPCNNNNNATISSYEDVLYLSSYASFNSGLDQQNRRCSLFLNPLLPLENPESLKPRGFIDAWSNAETVENNNGNTRKSPVSSNAKLSLSSLDLSMGGGSVGGEEMGSIHMGLGLMVSDGDTENGHKTHLSNWLTAAAPWAGSTTPGGPLAEVLRPSAVALATEATSNPPSPVLANAESGSPLATMVSSPSGVLQKTLGSTSDCSSNSSPTVASSRANSEFTFLLFNKAN 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01200 622 MobiDBLite consensus disorder prediction 256 293 - -
Accr3g01200 622 ProSiteProfiles WRC domain profile. 226 270 IPR014977 -
Accr3g01200 622 Pfam QLQ 169 201 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr3g01200 622 ProSiteProfiles QLQ domain profile. 169 204 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr3g01200 622 SMART QLQ_2 168 204 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr3g01200 622 MobiDBLite consensus disorder prediction 20 55 - -
Accr3g01200 622 Pfam WRC 227 269 IPR014977 -
Accr3g01200 622 PANTHER GROWTH-REGULATING FACTOR 5 150 482 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01200 Accr-Chr3 13521056 13523713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01200 137 546 GRF Transcription Factor Family AT4G24150 31.469 1.60e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr3g01200 WRC 6.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01200 - - qsa:O6P43_014940 570.466