Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01195 ATGGGGCTTTGTTGCAGCAAAAGCGTTTCCGTCGTCAACAATGAAACTGTTGCAGCCGATCACGGCCCTAAATCACCGCAGCCGGCGGCATCGCCCCTGCCCTCTGCCAACTCAGTGTCAGGAGCTGGTGATGTAACCCCTGGCAGGAGTACTCCCGCTCACTCGTTCTCCACTAGTCCCTTCACGAGCCCTCTCCCTCATGGGGTGGCCCCATCCCCGGCTAGAACTCCGGGTAGGAAATTCAGATGGCCTCTTCCGCCTCCATCGCCGGCGAAGCCGATCATGGCGGCGTTACTGAGACGGCAGGGGAAGACGAAACCGAAGGATGGGCCGATACCCGAGGAGCAAACCGAAGGTGGAGAGGTAGAGAGGCCATTGGACAAGAGCTTCGGATATTCAAAGAATATTGGGGCGAAGTATGAGCTGGGAAAAGAAGTAGGTCGAGGACATTTTGGTCATACTTGCTGGGCGAAAGCAAAGAAGGGAGACCTCAAGGGGCAATCTGTAGCTGTAAAAATCATATCGAAAGCTAAGATGACGACAGCAATATCAATTGAAGATGTAAGGAGGGAGGTGAAGATGTTGAAGGCCTTATCTGGACATAATAACATGGTGAAATTTCATGATGTATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGTGAGGGAGGAGAACTACTTGACAGAATTCTTTCAAGAGGTGGAAGATACACAGAGGATGATGCTAAAGCAATTCTTGTACAAATTCTAGATGTAGTTGCTTTTTGTCACCTTCAAGGAGTTGTTCACCGAGATCTAAAACCTGAGAATTTTCTTTTTGTCTCAAAAGGAGATGATTCTCCCATGAAGGTTATCGACTTTGGTCTATCGGATTTTGTTAGGCCAGATCAACGCCTCAATGATATTGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCCTACAGTGTGGAAGCAGACTTGTGGAGCATTGGAGTTATTACATACATATTGTTATGTGGAAGCAGACCATTCTGGGCACGCACTGAATCAGGAATCTTCCGATCTGTCCTAAGAGCTAATCCTAACTTTGATGATATACCCTGGCCATCAATATCACCAGAAGCCAAAGATTTTGTAAAGAAACTTTTGAACAAGGACCATAGAAAAAGGATGACTGCTGCCCAAGCTCTAGCTCATCCATGGTTGAGAAATGAAAACCGTGCCATTCCATTAGACATTTCAATCTTCAGGTCAGTCAAGTCATATGTGCGGGCTACACCTTTAAAACGAGCAGCACTGAAGGCTCTCTCAAAAGCCTTGACAGAAGATGAACTCATCTTTCTAAGAGCACAATTTAGCCTATTAGAACCAAACAATGGTTTTGTTTCCCTTGACAATTTTAGAGCGGCTCTCATGAAAAATGCTACTGATACCATGAAGGAATCAAGGGTCCCGGACATTTTAAATTTGATGGAGCAGCTGGCTTATAAAAAAATGGATTTTGAAGAGTTTTGTGCCGCGGCACTCAGTGTATACCAGCTTGAGGTTCATGTAGACTGGGAGAAAATTGCAGCCACTGCTTTTGAGCATTTCCAACGGGAAGGAAACAGGGTCATCTCAGTTGAGGAGTTGGCGCAGGAGTTGAATCTGGGCCCTTCAGCTTACACCGTACTAAGTGATTGGATCAGCAAATCTGATGGAAAACTAAGTTTCAATGGGTATACCAAGTACTTGCACGGGGTCACAATACGTAGTTCAAATTCAAGACAGCCACAGCAAGTATGA 1785 0.4583 MGLCCSKSVSVVNNETVAADHGPKSPQPAASPLPSANSVSGAGDVTPGRSTPAHSFSTSPFTSPLPHGVAPSPARTPGRKFRWPLPPPSPAKPIMAALLRRQGKTKPKDGPIPEEQTEGGEVERPLDKSFGYSKNIGAKYELGKEVGRGHFGHTCWAKAKKGDLKGQSVAVKIISKAKMTTAISIEDVRREVKMLKALSGHNNMVKFHDVFEDANNVYIVMELCEGGELLDRILSRGGRYTEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKGDDSPMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDIPWPSISPEAKDFVKKLLNKDHRKRMTAAQALAHPWLRNENRAIPLDISIFRSVKSYVRATPLKRAALKALSKALTEDELIFLRAQFSLLEPNNGFVSLDNFRAALMKNATDTMKESRVPDILNLMEQLAYKKMDFEEFCAAALSVYQLEVHVDWEKIAATAFEHFQREGNRVISVEELAQELNLGPSAYTVLSDWISKSDGKLSFNGYTKYLHGVTIRSSNSRQPQQV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01195 594 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01195 594 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01195 594 SUPERFAMILY EF-hand 429 580 IPR011992 -
Accr3g01195 594 FunFam CDPK-related kinase 1 438 509 - -
Accr3g01195 594 MobiDBLite consensus disorder prediction 31 65 - -
Accr3g01195 594 MobiDBLite consensus disorder prediction 102 128 - -
Accr3g01195 594 FunFam CDPK-related kinase 3 132 304 - -
Accr3g01195 594 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Accr3g01195 594 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Accr3g01195 594 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01195 594 Gene3D - 441 509 - -
Accr3g01195 594 MobiDBLite consensus disorder prediction 16 128 - -
Accr3g01195 594 SUPERFAMILY Protein kinase-like (PK-like) 139 425 IPR011009 -
Accr3g01195 594 FunFam Calcium-dependent protein kinase SK5 312 407 - -
Accr3g01195 594 Gene3D Transferase(Phosphotransferase) domain 1 229 416 - -
Accr3g01195 594 Gene3D - 417 576 - -
Accr3g01195 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 565 - -
Accr3g01195 594 CDD STKc_CAMK 139 401 - -
Accr3g01195 594 FunFam CDPK-related kinase 1 133 228 - -
Accr3g01195 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01195 Accr-Chr3 13473154 13479000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01195 1 585 EF-hand Containing Proteins AT3G50530 58.833 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr3g01195 Pkinase 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01195 K13412 - gmx:100803631 964.526