Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01154 ATGGACTTCGACCTGAGTGAACTCGATTTACCAAACATCGAATATTCACATGGCTTCTACTCCCATAACCCTACCTGGCATCAAGAAACATTATGGAAGATGTCACCTGTTATGGGTTTAGGTGGCATGGACCTTATGGTCCCACCACCGCCATATGAAAGCAACCCACCTTCTTACTCCAACCCGTTCGCTGAACTCGAAAATTTCGGCTCCAACTTCTCCGGGTTTGATTACAACAATTTCTTTTCTTTATATGATAACGTTGTGATCGACGAAAAGCCTCTTACCATTGCTCTGCCCAATCACTCTCGGTGCGAGTTTTTTCCGATTCATATGGCCCAATCTTCAAGTTCTATGTTCATTGGAGGTGGGTTTATTGCCCCTTCGATTAAAGAAGATGATGATCATGAGACCAGGAACAGGATTAACTATAACAAAATGAAAAGATCAGCCAATTTGGAACTAGACGATATAAGGAAGTATTTTGATGTTCCCATAACACAAGCTGCGAAACAACTGAAAGTGGGTTTGACCCTGCTTAAAAGAAGATGCAGAGAGCTCAATATTTCAAGGTGGCCTCATCGGAAAATCAAGAGCTTGAAGGTCCTCATCGACAATGTCAAGGAACTGGGTTTGGTAGAGGAGGTGGCTATGCTGGAGAATCATAAGAAGCTTATGGAGAAGTTGCCTGATGTGGAACTGAGTGAGCAAACTAAGAAGCTTAGGCAAGCATGTTTCAAAGCCAATTACAAAAGGAGAAGATTTTTGGCACTTCAAACCCAGGCCTAA 789 0.4271 MDFDLSELDLPNIEYSHGFYSHNPTWHQETLWKMSPVMGLGGMDLMVPPPPYESNPPSYSNPFAELENFGSNFSGFDYNNFFSLYDNVVIDEKPLTIALPNHSRCEFFPIHMAQSSSSMFIGGGFIAPSIKEDDDHETRNRINYNKMKRSANLELDDIRKYFDVPITQAAKQLKVGLTLLKRRCRELNISRWPHRKIKSLKVLIDNVKELGLVEEVAMLENHKKLMEKLPDVELSEQTKKLRQACFKANYKRRRFLALQTQA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01154 262 Pfam RWP-RK domain 152 200 IPR003035 -
Accr3g01154 262 ProSiteProfiles RWP-RK domain profile. 140 222 IPR003035 -
Accr3g01154 262 PANTHER PROTEIN RKD4 103 259 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01154 Accr-Chr3 12977968 12979015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01154 153 257 AtRKD Transcription Factor Family AT5G53040 63.810 5.17e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Accr3g01154 RWP-RK 9.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01154 - - pcin:129301849 295.819