Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01148 ATGGGGAAGAAGGGTGGAGGTGGTTGGTTCTCGTCGGTGAAGAAAGTTTTTAAGTCTTCTTCTAAGGGCTCGCCGGTGCCGGAGAGGAAGAAGGAAGATGAAGTGAAACGACAACATGAAGTTCCCGAGGTTGTGTTGTTTGAGAATTTTCCTGCTGAGAGTTCTCATGATGATATTACCAACGAGGATAGTACAACGTCCACGCCTGTGACTGAAGATAGACGACATGCCGTTGCCGTTGCTGCGGCAACTGCTGCAGCTGCTGAGGCAGCGGTCGTAGCCGCTCAAGCAGCGGCGAGAGTTGTTAAGATGGCGGGTTATGGTCGCCAATCCGAGGAAGACAGAGCAGCAACAATCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACGGCGAGCTTTAAAGGGATTGGTGAGACTGCAAGCGCTTGTGAGAGGTCACAATGTGAGAAAGCAAGCGCAAATGACAATGCGTTGTATGCAAGCGTTGGTGAGAGTGCAAGCCAGAGTTAGAGCTCGCAGGATTCAGCTGACTCATGACAAGCTTTACAAGAACATGATGGAACATGATTTAGTGCCCATGAGTCCCTTGTACGAGGATGTTTGGGGCAATAGGCGTCACAGTTTCCAGAGAATCAATGAAAGTGACTTGTGGAAGCATGAAGATGCAATGAAGAGGGAGAGAGCTATTGCTTACGCTTTTAACCATCAGAACCAGTCACCACATGCCGGCCTGAATCTTGGTGAAGAAATGGAAACATATTCCAACGAGCTTGAACAAGCCAAAAGGGGTTGGAACTGGCTAGAGCGTTGGATGTCCTCTCAACAACATCAAGCCAGGCACTTGGAGCCACCGGAGAACTCTTATCACATGACCCACGCTGCCACAACCACCACCCCCCCCACCACCACCACCACCACCACCACCGCTGATGACGTGTCTGAGAAGACGGTGCAAATGGACAGTATTGCCCCTCCAAGCTCAAGCAACACCATCATGGGCCAAGGCCTTCTTCTGGAATCAAGCCCAATTCCCAACAGGGGGCCCAATGACCTGCAGGCCCAGCATCACGCAAGTGTACCTAGCTATATGGCCCCGACCCAATCTGCGAAGGCCAAGGTAAGAGGTCAAGGCCCAGTCAAGCCACGTGTCTCTCCTGTGCCACAGTGGAATTCTTCGACAAGGAAGAGCTACGTTATTGGGCCGAGCTATGATTCCTCCAGCTCAGGTGGAGGAGGGGCAGGTTACCTGTTTATGAGGAGCCCAGGCCCGAAAATTAGTGGGGCCCGCCTACAGTCTAGAAGGATAGCAGGAGGAAGCTCAGAATATGTTGGTACCGAGGATTGGACACTGCCTCTAGGAGCCGGTGCTTGGGCATGA 1386 0.5202 MGKKGGGGWFSSVKKVFKSSSKGSPVPERKKEDEVKRQHEVPEVVLFENFPAESSHDDITNEDSTTSTPVTEDRRHAVAVAAATAAAAEAAVVAAQAAARVVKMAGYGRQSEEDRAATIIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLTHDKLYKNMMEHDLVPMSPLYEDVWGNRRHSFQRINESDLWKHEDAMKRERAIAYAFNHQNQSPHAGLNLGEEMETYSNELEQAKRGWNWLERWMSSQQHQARHLEPPENSYHMTHAATTTTPPTTTTTTTTADDVSEKTVQMDSIAPPSSSNTIMGQGLLLESSPIPNRGPNDLQAQHHASVPSYMAPTQSAKAKVRGQGPVKPRVSPVPQWNSSTRKSYVIGPSYDSSSSGGGGAGYLFMRSPGPKISGARLQSRRIAGGSSEYVGTEDWTLPLGAGAWA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01148 461 Pfam Protein of unknown function (DUF4005) 344 411 IPR025064 -
Accr3g01148 461 MobiDBLite consensus disorder prediction 292 312 - -
Accr3g01148 461 Gene3D - 112 160 - -
Accr3g01148 461 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Accr3g01148 461 Pfam IQ calmodulin-binding motif 115 131 IPR000048 GO:0005515
Accr3g01148 461 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Accr3g01148 461 SMART iq_5 112 133 IPR000048 GO:0005515
Accr3g01148 461 SMART iq_5 134 156 IPR000048 GO:0005515
Accr3g01148 461 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Accr3g01148 461 MobiDBLite consensus disorder prediction 278 312 - -
Accr3g01148 461 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Accr3g01148 461 MobiDBLite consensus disorder prediction 24 43 - -
Accr3g01148 461 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01148 Accr-Chr3 12909403 12913389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01148 1 427 IQD Protein Family AT3G49260 49.455 3.01e-94 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01148 - - aprc:113873497 426.402