Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01143 ATGGACGAAAGATTGTCCTGTAAGAAACACTACCTCTGCAACGAGCGTGGGATGGAAAATCCTTCTGGTGGTACTGGATTGTCGTCGGACGAAAGGGAGTGGAACCGGCCTAAAGTTGAAAGAAATTCTGAAAATGGGCTTGCAGGTTCTGTCAGCGATGGAGTTAGAGAAAATGGTGGTCCGAACATCATTCAAGAAACTGCGCGCCCTTTGCTTGGAGTGAAAGGGGAGGGAATGAATCCTGACGTTGAAAAAATGGGCATTGGGTCTCCGGGAGGGGGGGAACAAGTTCAGGTAGGCGAATTTGCGGCTCAAATTCTTAGCGATGGAGGGAAATTTGAAGCCGGGAATAGTGAAAGTGGAAATCAAGATGCCGTTCTAAGTCATCAGGGTGATGCTGATCAACCATGGAGCAGAGAAAGCACCGTTGGAAATGGCGGTGGTGTTGCTGACGCTGGTCAAGAAGAGCACGTGAGTATGGGAAGAGCACATGTTTGTGAAAATGACGCTGTGGGTCCTCCTGCTGTGTGTGAAGATGGGAATTTAGGTTGTTTAAAGGAGCTCGGGTCAAAAGAGGAGGGTGGCCATCTCAAAGTATCGCAGAAGAGGAGAGTTCTTGATGTTGAAGAGGGACCAGAGCGGTTAAGTGCCACTAGTAACGAGGAGGGAGATGAAATCTTGAGCCATTGGTTAAAAAGATGCCAGTCAAAGAGTTCCAAGAATAAGAACAAACAGCGTACTGGAGGAGAAACCATGGAATTGAATGAACAAACTGTCAATGGAGATGAAACTGCGGATACACATGGGAAAAACAATGCGCTCTCTGTCGAGATCATTGCTAGTGATGTAGAAACCATGGAATTGAATGGACAAACTGTTAATGGAGATGAAAGTGCGGATACACATGGGAAAAATAATGCGCTCTCTGTCGAGATCATTGCTAGTGATGTACGTGTAGGCAGTCTAGAGAATCATTGTCAACCAGAGGTTTTGAAAAGTGGAAAGAAGCGTGGTAGACCGAAGGGCTCAAAAAACAAAATTAAGAGTAACTTGTGTGCTATTGATGCAGATGCAGGTGGCATTAAAATGCCAAAGACGTGTGATAGACCCAAGGAATCTATAAGTGGACGGAAGATTATCCCGAGTCATAGGAATTCAAATTCAGTTGACACTAAAGCACTAAAGAAGCTTGGCAGGCCAAAGGGCTCAAAAAATAAAATGAGGAGTAGTGCAAGTAATGTTGGTGTTGCTGATATTGAAGCACCAGAAAAGCGAGGTCGACCAAAGGGTGCAAAAAATAAACAGCGGAGTGTTGTCTGTGTTGGTAATGCTGATGTGGATGACATTGTAACACCAAAAAAAAGAGGTCGGCCAAATGGTTCAAATAATAAGAAGGGGATGGTTGTATGCGTTAGTAATAAAGGTGCAATTGACATTGGAACACCCAAGAAGCGTGGTAGACCAAGAGGTTCAAAAATGAAAATGCTGGGTATTGCCTGTGCTAGCAATGTAAGTGCAGGTGACATTGAAAACCCAAAGAAGTCTATAGTGAAGTATGGTCAACCACGGAAATCAAGAAACAAGAAGAAAAAATTGGGAGATCAGACAGATGATGAAACGTGTGGTGAAGTTATGTTTGTTCATAAGGTATGTGATAAAACTATTGGTCTTATAGGTTTGGGAAATAATTTAGCCAATATTGTAGGTGTTCAATCACAAAGGGCTACTCATGTTAGTGATGGGAATGAGGATATGCCTTCAAAGGGCTCTGGTGATGGTGAGGTTCAAAATGAGAACAACCATGTTAACATTAAGCATGATCAACCAAAGGGTAATATTGAAAGAAAAGAGCATTTGACTAGAAAATTTTCTGGGGAATCTAATGAGGAAATGTTGGACATTTCCTTGGCCATACCAGAGAATGCGATCATTACCGCTGAAGTTGAGGGAGACAAGGAATTTACTATTGGTAGATCTAGTAAAAGTGGATCTGGAAACAATGGTGATAAGGCAGATAATAGGTGGGGCAGGCTGAACAGCTTCAGTGACAAAGAAAAGGAGACTGTCCGGTCTTTTAATTCAGAGGTTGAGAGATGTGACCATGCAGCTGAGATAGTTGGAAGAACATCTGCTGAAGCTTCTTGTAGAAACGGTTTTGATGGGCAAGAAGTTAAGCATGGAAAACAGAGTTTAAAAAAGAAGAGACTATGTATCGAGCGCTACCAATTGAAGAGTTCAAGGGGAAAGGCACCAACTACAGCTGCTGTGGTAGATGAGAGTGAATCAGTTGAAGTGAAATACAAATCTAGGAGGAATGAGCGATCAAATAACAAGAGAGTCCAGTCCTTACAAAATGAGAAGAAGATTCTTTCTGGTAGATTGATTAAATACTCTAGGGATCCTGGAAATAAAAAGATGAAAACAAAATGGTTAAAATGCGGACCTGGCAGTATTCGGACAAGGTCTAGAGGAAGGCTGAGAAAATTGTCAAACCATATAGTGGAAACTTCTGGCAGCAGCATCCAGAAAAGGTGTAGTGAAAGACTGAGAAAGTTGTCAATCCGTGGATTAGACTCTTCAGGTTTGATTGTTGATTCCAGAAGGAAAAAGGGCCTGAGGGGTGTAATGTGCCACCAGTGCTGGAGGAGTGATAGGAGTGGTGTTGTCATTTGTGGCAATTGCAAACGGAAGCGATATTGCTATGAGTGCGTAACAAAATGGTACCCAGACAAAACAAGAGAGGAGATAGAATTTTCCTGTCCCTTTTGCCTTGGTAATTGCAATTGTCGGTTGTGTTTGAAGGAGGCTGTATCTGCAGAGAGTGCGAGTGTTGAATCAGATACTGATATCAATTTACAAAAGTTGCTCTACTTGCTTAAGAAAATTCTTCCTTTACTCCAGCATATCCAACAAGAGCAGAGATCAGAAATCGAAATAGAATCTAGCTTGCTTGGTTCACTACTGACAGAAGAAAATATCATGCAGTCACAGATTGATGATGATGATAGAGTGTATTGTGACAACTGTAATACATCCATCGTCAACTTGCACAGAAGTTGTCCTAATCCTAGTTGTAGTTACGATCTCTGTCTCACTTGTTGCATGGAACTAAGAAATGGACTTCATTGTGGACGGGCTGATATCTCATCCGAATTGTCTTGGAAAGCAAATATAAATGGTTCGATTCCTTGCCCTCCAAAATCAAAAGGAGGCTGTGGTACTACAATTCTCTCATTGAGACGCCTATTTAAAGCTAATTGGGTGGACGAATTGGTTGAGAACGCAGGGGAACTTACCATCAAATATGAGCCCCCTAATGTTGATTCCACTAAAGGATGTTTGTTGTGCCATAATTTTAGGATTGACACAGAACAGGATTTTGTCAGGCAAGCGGCTTCCAGAGAAAACTGCCATGATAATTTTTTGTTCTGCCCAAATGCTATGCACATGGGAGATAAAGAATTCAAGCATTTCCAGATGCATTGGATAAGTGGTGAGCCTGTTATAGTCAGGAATGCATTTGAAAAGGGTAGGGGCCTTAGCTGGGATCCAATGGTGATGTGGAGGGCTTTTAGGGGGGCAAAGAGGATACTAAAAGAGGAGGCAACTGCGGTTAAAGCCATTGACTGCTTAGATTGGTGCGAGGTTGAAATTAGTATCTTACAGTTCTTTAAGGGCTACCTCGAAGGTCGTAGGTATAAAAATGGTTGGCCTGAGATGTTGAAGCTTAAGGATTGGCCTCCATCAAATGCTTTTGAAGAGTGTTTCCCTAGGCATGGTGCTGAGTTTATTGCTATGCTTCCATTCAGTGACTATACTCATCCCAAATCTGGTATTCTAAATCTCACTACGAAGCTACCTATTGTTTTAAAGCCAGATTTGGGCCCCAAAACATACATTGCATATGGATCTTTAGAAGAGCTCGGCAGAGGTGATTCTGTAACAAAACTGCATTGTGACATCTCAGATGCGGTCAATATATTGACACATACAGCAGAAGTAAAGATACCACCACAGCAAAGAAAAGCCATAAAAAAATTACAGAAAAAGCATGAAGCTGAAGATATTTGTGCGCTCTATGGCTGGAAGAATGAAGGATTGGATTCTTTTACAAAAAAACCAAAACGGTGCCGCCTCGATGTAAGCACGGATTTGAAAACCCCTAGAAAAGAAGACATTATCGTGGGAGACTCTAATGTAATTAAAAGTCAGGTATCAGAGGAAGAGAATATGAATGAACAGCGGAATATGTCGGGAGATTTTGGACCCTCAAGAGCATATATGGCAGCTAGCACTCTAAAACACGCAGCTTCTCCCAAAAGTCAAAAAAAAGACTGTGAATGGATGCACGGTGACGTTAAGCATGTTGTCAAAAAATGCTCATTATCACATGATGGACATTATGAAGGAATTTCATCCCCTGAACTTATGCTGTCTAAAACATTCACTAAAGACAGTTATGAAAAAGAAAAAACTTCTGCTTCGGTAAATCAGGACAATTTAACAAATTTTACTGAACAATCTGAATCAAAAGGCAGGTGCATGTGTGCTGAGGAGTCTCCTAATGCAATCATTCCCAACTTTGAGAATGATTGTGACAGTTCCTGTGCGGGGATATGTTCTGAAGTCAAGAATGACAAAATAGAGTCACTAAGAAATGATACGAAAACAGCAAAATCTTTCCTTGAAAATGATGTTGTGTCAGACGCCCAATACGGGAGTGCTGTATGGGACATATTTCGTAGGCAAGATGTCCCAAAGCTGACGGAGTACCTGAAGAAACACTGCAGAGAATTCCGTCACGTAGATAATCTTCCTGTGAAATCTATAATACATCCAATTCATGACCAAACTCTTTATCTAAACGAAAGACATAAAAAGCAGCTAAAGGAAGAATTTGGCATTGAACCATGGACATTTGAGCAATTCCTTGGGGAGGCTGTTTTCATACCTGCAGGCTGCCCGCATCAAGTCAGGAATAGACAGTCTTGCATAAAAGTGGCTCTCGACTTTGTTTCACCTGAAAATGTTCAAGAGTGCTTTCGATTGACGGATGAGTTTCGGCTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTGGAGATAAAGAAGATGGCATTATATGCTGCTGACGCTGCTATAGCTGAAGCCATGAAATTAATGCAGAGGATATGA 5178 0.4173 MDERLSCKKHYLCNERGMENPSGGTGLSSDEREWNRPKVERNSENGLAGSVSDGVRENGGPNIIQETARPLLGVKGEGMNPDVEKMGIGSPGGGEQVQVGEFAAQILSDGGKFEAGNSESGNQDAVLSHQGDADQPWSRESTVGNGGGVADAGQEEHVSMGRAHVCENDAVGPPAVCEDGNLGCLKELGSKEEGGHLKVSQKRRVLDVEEGPERLSATSNEEGDEILSHWLKRCQSKSSKNKNKQRTGGETMELNEQTVNGDETADTHGKNNALSVEIIASDVETMELNGQTVNGDESADTHGKNNALSVEIIASDVRVGSLENHCQPEVLKSGKKRGRPKGSKNKIKSNLCAIDADAGGIKMPKTCDRPKESISGRKIIPSHRNSNSVDTKALKKLGRPKGSKNKMRSSASNVGVADIEAPEKRGRPKGAKNKQRSVVCVGNADVDDIVTPKKRGRPNGSNNKKGMVVCVSNKGAIDIGTPKKRGRPRGSKMKMLGIACASNVSAGDIENPKKSIVKYGQPRKSRNKKKKLGDQTDDETCGEVMFVHKVCDKTIGLIGLGNNLANIVGVQSQRATHVSDGNEDMPSKGSGDGEVQNENNHVNIKHDQPKGNIERKEHLTRKFSGESNEEMLDISLAIPENAIITAEVEGDKEFTIGRSSKSGSGNNGDKADNRWGRLNSFSDKEKETVRSFNSEVERCDHAAEIVGRTSAEASCRNGFDGQEVKHGKQSLKKKRLCIERYQLKSSRGKAPTTAAVVDESESVEVKYKSRRNERSNNKRVQSLQNEKKILSGRLIKYSRDPGNKKMKTKWLKCGPGSIRTRSRGRLRKLSNHIVETSGSSIQKRCSERLRKLSIRGLDSSGLIVDSRRKKGLRGVMCHQCWRSDRSGVVICGNCKRKRYCYECVTKWYPDKTREEIEFSCPFCLGNCNCRLCLKEAVSAESASVESDTDINLQKLLYLLKKILPLLQHIQQEQRSEIEIESSLLGSLLTEENIMQSQIDDDDRVYCDNCNTSIVNLHRSCPNPSCSYDLCLTCCMELRNGLHCGRADISSELSWKANINGSIPCPPKSKGGCGTTILSLRRLFKANWVDELVENAGELTIKYEPPNVDSTKGCLLCHNFRIDTEQDFVRQAASRENCHDNFLFCPNAMHMGDKEFKHFQMHWISGEPVIVRNAFEKGRGLSWDPMVMWRAFRGAKRILKEEATAVKAIDCLDWCEVEISILQFFKGYLEGRRYKNGWPEMLKLKDWPPSNAFEECFPRHGAEFIAMLPFSDYTHPKSGILNLTTKLPIVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILTHTAEVKIPPQQRKAIKKLQKKHEAEDICALYGWKNEGLDSFTKKPKRCRLDVSTDLKTPRKEDIIVGDSNVIKSQVSEEENMNEQRNMSGDFGPSRAYMAASTLKHAASPKSQKKDCEWMHGDVKHVVKKCSLSHDGHYEGISSPELMLSKTFTKDSYEKEKTSASVNQDNLTNFTEQSESKGRCMCAEESPNAIIPNFENDCDSSCAGICSEVKNDKIESLRNDTKTAKSFLENDVVSDAQYGSAVWDIFRRQDVPKLTEYLKKHCREFRHVDNLPVKSIIHPIHDQTLYLNERHKKQLKEEFGIEPWTFEQFLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECFRLTDEFRLLPKNHRSKEDKLEIKKMALYAADAAIAEAMKLMQRI 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01143 1725 MobiDBLite consensus disorder prediction 363 436 - -
Accr3g01143 1725 MobiDBLite consensus disorder prediction 115 142 - -
Accr3g01143 1725 SUPERFAMILY Clavaminate synthase-like 1152 1713 - -
Accr3g01143 1725 ProSiteProfiles JmjC domain profile. 1275 1688 IPR003347 -
Accr3g01143 1725 MobiDBLite consensus disorder prediction 14 80 - -
Accr3g01143 1725 MobiDBLite consensus disorder prediction 513 537 - -
Accr3g01143 1725 Pfam JmjC domain, hydroxylase 1571 1671 IPR003347 -
Accr3g01143 1725 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1497 1697 - -
Accr3g01143 1725 ProSiteProfiles Zinc finger RING-type profile. 877 923 IPR001841 -
Accr3g01143 1725 Gene3D Cupin 1137 1412 - -
Accr3g01143 1725 Gene3D Cupin 1533 1697 - -
Accr3g01143 1725 MobiDBLite consensus disorder prediction 655 679 - -
Accr3g01143 1725 MobiDBLite consensus disorder prediction 111 152 - -
Accr3g01143 1725 MobiDBLite consensus disorder prediction 363 378 - -
Accr3g01143 1725 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 603 1722 IPR045109 GO:0032454|GO:0033169
Accr3g01143 1725 SMART cupin_9 1256 1688 IPR003347 -
Accr3g01143 1725 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 873 939 IPR018866 -
Accr3g01143 1725 SMART AT_hook_2 422 434 IPR017956 GO:0003677
Accr3g01143 1725 SMART AT_hook_2 394 406 IPR017956 GO:0003677
Accr3g01143 1725 SMART AT_hook_2 482 494 IPR017956 GO:0003677
Accr3g01143 1725 SMART AT_hook_2 334 346 IPR017956 GO:0003677
Accr3g01143 1725 SMART AT_hook_2 452 464 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01143 Accr-Chr3 12854596 12863799 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr3g01143 JmjC 2.1e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01143 K15601 - lja:Lj1g3v0725870.1 1180.24