Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01142 ATGGACGAACCTCATGAATTGTTCCAGTCTTCGGGAGGCACTGCCTGGAACTGCAGTGAAGGAGTAATGGACGAAAGATTGTCCTGTAAGAAACACTACCTCTGCAACGAGCGTGGGATGGAAAATCCTTCTGGTGGTACTGGATTGTCGTCGGACGAAAGGGAGTGGAACCGGCCTAAAGTTGAAAGAAATTCTGAAAATGGGCTTGCAGGTTCTGTCAGCGATGGAGTTAGAGAAAATGGTGGTCCGAACATCATTCAAGAAACTGCGCGCCCTTTGCTTGGAGTGAAAGGGGAGGGAATGAATCCTGACGTTGAAAAAATGGGCATTGGGTCTCCGGGAGGGGGGGAACAAGTTCAGGTAGGCGAATTTGCGGCTCAAATTCTTAGCGATGGAGGGAAATTTGAAGCCGGGAATAGTGAAAGTGGAAATCAAGATGCCGTTCTAAGTCATCAGGGTGATGCTGATCAACCATGGAGCAGAGAAAGCACCGTTGGAAATGGCGGTGGTGTTGCTGACGCTGGTCAAGAAGAGCACGTGAGTATGGGAAGAGCACATGTTTGTGAAAATGACGCTGTGGGTCCTCCTGCTGTGTGTGAAGATGGGAATTTAGGTTGTTTAAAGGAGCTCGGGTCAAAAGAGGAGGGTGGCCATCTCAAAGTATCGCAGAAGAGGAGAGTTCTTGATGTTGAAGAGGGACCAGAGCGGTTAAGTGCCACTAGTAACGAGGAGGGAGATGAAATCTTGAGCCATTGGTTAAAAAGATGCCAGTCAAAGAGTTCCAAGAATAAGAACAAACAGCGTACTGGAGGAGAAACCATGGAATTGAATGAACAAACTGTCAATGGAGATGAAACTGCGGATACACATGGGAAAAACAATGCGCTCTCTGTCGAGATCATTGCTAGTGATGTAGAAACCATGGAATTGAATGGACAAACTGTTAATGGAGATGAAAGTGCGGATACACATGGGAAAAATAATGCGCTCTCTGTCGAGATCATTGCTAGTGATGTACGTGTAGGCAGTCTAGAGAATCATTGTCAACCAGAGGTTTTGAAAAGTGGAAAGAAGCGTGGTAGACCGAAGGGCTCAAAAAACAAAATTAAGAGTAACTTGTGTGCTATTGATGCAGATGCAGGTGGCATTAAAATGCCAAAGACGTGTGATAGACCCAAGGAATCTATAAGTGGACGGAAGATTATCCCGAGTCATAGGAATTCAAATTCAGTTGACACTAAAGCACTAAAGAAGCTTGGCAGGCCAAAGGGCTCAAAAAATAAAATGAGGAGTAGTGCAAGTAATGTTGGTGTTGCTGATATTGAAGCACCAGAAAAGCGAGGTCGACCAAAGGGTGCAAAAAATAAACAGCGGAGTGTTGTCTGTGTTGGTAATGCTGATGTGGATGACATTGTAACACCAAAAAAAAGAGGTCGGCCAAATGGTTCAAATAATAAGAAGGGGATGGTTGTATGCGTTAGTAATAAAGGTGCAATTGACATTGGAACACCCAAGAAGCGTGGTAGACCAAGAGGTTCAAAAATGAAAATGCTGGGTATTGCCTGTGCTAGCAATGTAAGTGCAGGTGACATTGAAAACCCAAAGAAGTCTATAGTGAAGTATGGTCAACCACGGAAATCAAGAAACAAGAAGAAAAAATTGGGAGATCAGACAGATGATGAAACGTGTGGTGAAGTTATGTTTGTTCATAAGGTATGTGATAAAACTATTGGTCTTATAGGTTTGGGAAATAATTTAGCCAATATTGTAGGTGTTCAATCACAAAGGGCTACTCATGTTAGTGATGGGAATGAGGATATGCCTTCAAAGGGCTCTGGTGATGGTGAGGTTCAAAATGAGAACAACCATGTTAACATTAAGCATGATCAACCAAAGGGTAATATTGAAAGAAAAGAGCATTTGACTAGAAAATTTTCTGGGGAATCTAATGAGGAAATGTTGGACATTTCCTTGGCCATACCAGAGAATGCGATCATTACCGCTGAAGTTGAGGGAGACAAGGAATTTACTATTGGTAGATCTAGTAAAAGTGGATCTGGAAACAATGGTGATAAGGCAGATAATAGGTGGGGCAGGCTGAACAGCTTCAGTGACAAAGAAAAGGAGACTGTCCGGTCTTTTAATTCAGAGGTTGAGAGATGTGACCATGCAGCTGAGATAGTTGGAAGAACATCTGCTGAAGCTTCTTGTAGAAACGGTTTTGATGGGCAAGAAGTTAAGCATGGAAAACAGAGTTTAAAAAAGAAGAGACTATGTATCGAGCGCTACCAATTGAAGAGTTCAAGGGGAAAGGCACCAACTACAGCTGCTGTGGTAGATGAGAGTGAATCAGTTGAAGTGAAATACAAATCTAGGAGGAATGAGCGATCAAATAACAAGAGAGTCCAGTCCTTACAAAATGAGAAGAAGATTCTTTCTGGTAGATTGATTAAATACTCTAGGGATCCTGGAAATAAAAAGATGAAAACAAAATGGTTAAAATGCGGACCTGGCAGTATTCGGACAAGGTCTAGAGGAAGGCTGAGAAAATTGTCAAACCATATAGTGGAAACTTCTGGCAGCAGCATCCAGAAAAGGTGTAGTGAAAGACTGAGAAAGTTGTCAATCCGTGGATTAGACTCTTCAGGTTTGATTGTTGATTCCAGAAGGAAAAAGGGCCTGAGGGGTGTAATGTGCCACCAGTGCTGGAGGAGTGATAGGAGTGGTGTTGTCATTTGTGGCAATTGCAAACGGAAGCGATATTGCTATGAGTGCGTAACAAAATGGTACCCAGACAAAACAAGAGAGGAGATAGAATTTTCCTGTCCCTTTTGCCTTGGTAATTGCAATTGTCGGTTGTGTTTGAAGGAGGCTGTATCTGCAGAGAGTGCGAGTGTTGAATCAGATACTGATATCAATTTACAAAAGTTGCTCTACTTGCTTAAGAAAATTCTTCCTTTACTCCAGCATATCCAACAAGAGCAGAGATCAGAAATCGAAATAGAATCTAGCTTGCTTGGTTCACTACTGACAGAAGAAAATATCATGCAGTCACAGATTGATGATGATGATAGAGTGTATTGTGACAACTGTAATACATCCATCGTCAACTTGCACAGAAGTTGTCCTAATCCTAGTTGTAGTTACGATCTCTGTCTCACTTGTTGCATGGAACTAAGAAATGGACTTCATTGTGGACGGGCTGATATCTCATCCGAATTGTCTTGGAAAGCAAATATAAATGGTTCGATTCCTTGCCCTCCAAAATCAAAAGGAGGCTGTGGTACTACAATTCTCTCATTGAGACGCCTATTTAAAGCTAATTGGGTGGACGAATTGGTTGAGAACGCAGGGGAACTTACCATCAAATATGAGCCCCCTAATGTTGATTCCACTAAAGGATGTTTGTTGTGCCATAATTTTAGGATTGACACAGAACAGGATTTTGTCAGGCAAGCGGCTTCCAGAGAAAACTGCCATGATAATTTTTTGTTCTGCCCAAATGCTATGCACATGGGAGATAAAGAATTCAAGCATTTCCAGATGCATTGGATAAGTGGTGAGCCTGTTATAGTCAGGAATGCATTTGAAAAGGGTAGGGGCCTTAGCTGGGATCCAATGGTGATGTGGAGGGCTTTTAGGGGGGCAAAGAGGATACTAAAAGAGGAGGCAACTGCGGTTAAAGCCATTGACTGCTTAGATTGGTGCGAGGTTGAAATTAGTATCTTACAGTTCTTTAAGGGCTACCTCGAAGGTCGTAGGTATAAAAATGGTTGGCCTGAGATGTTGAAGCTTAAGGATTGGCCTCCATCAAATGCTTTTGAAGAGTGTTTCCCTAGGCATGGTGCTGAGTTTATTGCTATGCTTCCATTCAGTGACTATACTCATCCCAAATCTGGTATTCTAAATCTCACTACGAAGCTACCTATTGTTTTAAAGCCAGATTTGGGCCCCAAAACATACATTGCATATGGATCTTTAGAAGAGCTCGGCAGAGGTGATTCTGTAACAAAACTGCATTGTGACATCTCAGATGCGGTCAATATATTGACACATACAGCAGAAGTAAAGATACCACCACAGCAAAGAAAAGCCATAAAAAAATTACAGAAAAAGCATGAAGCTGAAGATATTTGTGCGCTCTATGGCTGGAAGAATGAAGGATTGGATTCTTTTACAAAAAAACCAAAACGGTGCCGCCTCGATGTATCAGAGGAAGAGAATATGAATGAACAGCGGAATATGTCGGGAGATTTTGGACCCTCAAGAGCATATATGGCAGCTAGCACTCTAAAACACGCAGCTTCTCCCAAAAGTCAAAAAAAAGACTGTGAATGGATGCACGGTGACGTTAAGCATGTTGTCAAAAAATGCTCATTATCACATGATGGACATTATGAAGGAATTTCATCCCCTGAACTTATGCTGTCTAAAACATTCACTAAAGACAGTTATGAAAAAGAAAAAACTTCTGCTTCGGTAAATCAGGACAATTTAACAAATTTTACTGAACAATCTGAATCAAAAGGCAGGTGCATGTGTGCTGAGGAGTCTCCTAATGCAATCATTCCCAACTTTGAGAATGATTGTGACAGTTCCTGTGCGGGGATATGTTCTGAAGTCAAGAATGACAAAATAGAGTCACTAAGAAATGATACGAAAACAGCAAAATCTTTCCTTGAAAATGATGTTGTGTCAGACGCCCAATACGGGAGTGCTGTATGGGACATATTTCGTAGGCAAGATGTCCCAAAGCTGACGGAGTACCTGAAGAAACACTGCAGAGAATTCCGTCACGTAGATAATCTTCCTGTGAAATCTATAATACATCCAATTCATGACCAAACTCTTTATCTAAACGAAAGACATAAAAAGCAGCTAAAGGAAGAATTTGGCATTGAACCATGGACATTTGAGCAATTCCTTGGGGAGGCTGTTTTCATACCTGCAGGCTGCCCGCATCAAGTCAGGAATAGACAGTCTTGCATAAAAGTGGCTCTCGACTTTGTTTCACCTGAAAATGTTCAAGAGTGCTTTCGATTGACGGATGAGTTTCGGCTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTGGAGATAAAGAAGATGGCATTATATGCTGCTGACGCTGCTATAGCTGAAGCCATGAAATTAATGCAGAGGATATGA 5172 0.4192 MDEPHELFQSSGGTAWNCSEGVMDERLSCKKHYLCNERGMENPSGGTGLSSDEREWNRPKVERNSENGLAGSVSDGVRENGGPNIIQETARPLLGVKGEGMNPDVEKMGIGSPGGGEQVQVGEFAAQILSDGGKFEAGNSESGNQDAVLSHQGDADQPWSRESTVGNGGGVADAGQEEHVSMGRAHVCENDAVGPPAVCEDGNLGCLKELGSKEEGGHLKVSQKRRVLDVEEGPERLSATSNEEGDEILSHWLKRCQSKSSKNKNKQRTGGETMELNEQTVNGDETADTHGKNNALSVEIIASDVETMELNGQTVNGDESADTHGKNNALSVEIIASDVRVGSLENHCQPEVLKSGKKRGRPKGSKNKIKSNLCAIDADAGGIKMPKTCDRPKESISGRKIIPSHRNSNSVDTKALKKLGRPKGSKNKMRSSASNVGVADIEAPEKRGRPKGAKNKQRSVVCVGNADVDDIVTPKKRGRPNGSNNKKGMVVCVSNKGAIDIGTPKKRGRPRGSKMKMLGIACASNVSAGDIENPKKSIVKYGQPRKSRNKKKKLGDQTDDETCGEVMFVHKVCDKTIGLIGLGNNLANIVGVQSQRATHVSDGNEDMPSKGSGDGEVQNENNHVNIKHDQPKGNIERKEHLTRKFSGESNEEMLDISLAIPENAIITAEVEGDKEFTIGRSSKSGSGNNGDKADNRWGRLNSFSDKEKETVRSFNSEVERCDHAAEIVGRTSAEASCRNGFDGQEVKHGKQSLKKKRLCIERYQLKSSRGKAPTTAAVVDESESVEVKYKSRRNERSNNKRVQSLQNEKKILSGRLIKYSRDPGNKKMKTKWLKCGPGSIRTRSRGRLRKLSNHIVETSGSSIQKRCSERLRKLSIRGLDSSGLIVDSRRKKGLRGVMCHQCWRSDRSGVVICGNCKRKRYCYECVTKWYPDKTREEIEFSCPFCLGNCNCRLCLKEAVSAESASVESDTDINLQKLLYLLKKILPLLQHIQQEQRSEIEIESSLLGSLLTEENIMQSQIDDDDRVYCDNCNTSIVNLHRSCPNPSCSYDLCLTCCMELRNGLHCGRADISSELSWKANINGSIPCPPKSKGGCGTTILSLRRLFKANWVDELVENAGELTIKYEPPNVDSTKGCLLCHNFRIDTEQDFVRQAASRENCHDNFLFCPNAMHMGDKEFKHFQMHWISGEPVIVRNAFEKGRGLSWDPMVMWRAFRGAKRILKEEATAVKAIDCLDWCEVEISILQFFKGYLEGRRYKNGWPEMLKLKDWPPSNAFEECFPRHGAEFIAMLPFSDYTHPKSGILNLTTKLPIVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILTHTAEVKIPPQQRKAIKKLQKKHEAEDICALYGWKNEGLDSFTKKPKRCRLDVSEEENMNEQRNMSGDFGPSRAYMAASTLKHAASPKSQKKDCEWMHGDVKHVVKKCSLSHDGHYEGISSPELMLSKTFTKDSYEKEKTSASVNQDNLTNFTEQSESKGRCMCAEESPNAIIPNFENDCDSSCAGICSEVKNDKIESLRNDTKTAKSFLENDVVSDAQYGSAVWDIFRRQDVPKLTEYLKKHCREFRHVDNLPVKSIIHPIHDQTLYLNERHKKQLKEEFGIEPWTFEQFLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECFRLTDEFRLLPKNHRSKEDKLEIKKMALYAADAAIAEAMKLMQRI 1723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01142 1723 Gene3D Cupin 1531 1695 - -
Accr3g01142 1723 Gene3D Cupin 1159 1489 - -
Accr3g01142 1723 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1495 1695 - -
Accr3g01142 1723 Pfam JmjC domain, hydroxylase 1569 1669 IPR003347 -
Accr3g01142 1723 SMART cupin_9 1278 1686 IPR003347 -
Accr3g01142 1723 MobiDBLite consensus disorder prediction 385 400 - -
Accr3g01142 1723 ProSiteProfiles Zinc finger RING-type profile. 899 945 IPR001841 -
Accr3g01142 1723 SUPERFAMILY Clavaminate synthase-like 1174 1711 - -
Accr3g01142 1723 ProSiteProfiles JmjC domain profile. 1297 1686 IPR003347 -
Accr3g01142 1723 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 488 1720 IPR045109 GO:0032454|GO:0033169
Accr3g01142 1723 MobiDBLite consensus disorder prediction 35 84 - -
Accr3g01142 1723 MobiDBLite consensus disorder prediction 137 164 - -
Accr3g01142 1723 MobiDBLite consensus disorder prediction 385 458 - -
Accr3g01142 1723 MobiDBLite consensus disorder prediction 535 559 - -
Accr3g01142 1723 MobiDBLite consensus disorder prediction 133 175 - -
Accr3g01142 1723 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 895 961 IPR018866 -
Accr3g01142 1723 SMART AT_hook_2 444 456 IPR017956 GO:0003677
Accr3g01142 1723 SMART AT_hook_2 416 428 IPR017956 GO:0003677
Accr3g01142 1723 SMART AT_hook_2 504 516 IPR017956 GO:0003677
Accr3g01142 1723 SMART AT_hook_2 356 368 IPR017956 GO:0003677
Accr3g01142 1723 SMART AT_hook_2 474 486 IPR017956 GO:0003677
Accr3g01142 1723 MobiDBLite consensus disorder prediction 677 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01142 Accr-Chr3 12854596 12863865 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr3g01142 JmjC 2.1e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01142 K15601 - lja:Lj1g3v0725870.1 1154.81