Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01134 ATGAACTACGACAGGCTCCAACCCTCCCGGCCCGGCGGCTCCTCCCGCCGCTCCGATGACCCCATTCCTCCCTCCGCCTCCTCCCGCAGCAAGAAGAAACTCATCTTCCTCTCCGCACTCGCTCTTGTCCTGATCGTCGCTTCAACCCTCTCCGCCGTCCTCCTTGTCCGCACCCGACCTCGGTCTACGCCTCCACACGATTCCGACGTTGGCGGCAAGCCCACTCAGGCCATCTCACGCACCTGCGACAAAACTCGGTTCCCTTCCCTCTGCGTTAAGTCCCTCCTCGATTTCCCGGGTTCCGCCGCCGCATCGGAGCAGGACCTCGTCCACATTTCTCTCAACATGACATTGCAACACCTAAGTAAAGCCCTCTATTCCTCCACCGCCATCTCCGCCACCCAGATGAATCCGCTTGAACGGTCCGCCTACGAGGACTGCCTCGAGCTCCTCGAGGATTCCGTCGACGGGTTCCTCCGCTCCCTCACCTCAGGATCCACCGGTGGAGGATCCACCGACGATGTGCTGACGTGGCTCAGTGCAGCTCTCACGAATCTAGACACGTGCAGCGAGGGGTTCGCGGACACGAGCGGCACCGTGAAATATCAGATGGCAAGTAATTTAAAGGACTTGTCCGAGCTCATTAGCAACTGTCTCGCCATATACGCAGGCAGCGATGCCGGCAACGATTTCTCAGGGGTTCCGATTCAGAACAGGAGAAGATTAATGGGAGACAATCACAATGGCGATGTCTCAGATGAATTCCCGGCCTGGTTAAGCAAAAGAGACAGAAGATTGTTGGCCACGCCGGCACCGTCGATTCAAGCTGATATCGTCGTGTCGAAGGACGGAAGCGGAACCGTTGAGACCATCGCGGAGGCGATAAAGAAAGTGCCCGAGCACAGTAGTCGCCGGATTGTTGTGTACGTGAAGGCAGGAAGCTACGAAGAGGAAAATTTGAAAGTTGGGAGGAAGAAAACCAATGTGATGTTCGTAGGTGATGGGAAGGGCAAGACAATCATCACAGGTGGCAGAAATTATGCTCAAGGCACCACCACCTTCCACACTGCCTCCTTCGCTGCTACTGGGGCTGGTTTTATTGCAAAGGACATGACATTTGAGAACTATGCGGGGCCCGGGAAGCACCAAGCAGTGGCGCTTCGTGTCGGAGCCGACCATGCGGTGGTGTACCGATGTAGCATCGTCGGATACCAAGACACATGTTATGTGCATTCCAACCGTCAGTTCTTCCGGGAATGTGACATTTATGGAACCATTGACTTCATCTTCGGCAACGCCGCTGTGGTTTTCCAGAGCTGCAACCTTGTATCTCGAAAGCCCATGGACCAACAGAAGAACACCATAACGGCCCAAAATCGAAAAGACCCGAATCAGAACACGGGTATTTCAATTCATAACTGTCGGATCCAAGCGGCTTCGGATCTGGAGGCAGCTAAGGGAAGCATCCCAACCTATCTGGGCCGTCCATGGAAGACGTACGCGAGAACCGTCTACATGCTATCCTACATGGGTGATCACATCAATCCACGTGGATGGTTGGAGTGGAATGCCACGGCTTCAGTAGACAAATTGTATTTTGGAGAGTATATGAATAGTGGGCCGGGTGCAGCTGTTGGAGGCCGGGTCAAATGGCCAGGGTATCGGGTTATAACATCCGCGGTGGAGGCAAGTAGATTCACGGTGGCTCAATTCATAGCAGGGTCGTCATGGTTGCCGTCAACAGGGGTGGCATTTGTCGGAGGACTATCTAGCTAA 1776 0.5462 MNYDRLQPSRPGGSSRRSDDPIPPSASSRSKKKLIFLSALALVLIVASTLSAVLLVRTRPRSTPPHDSDVGGKPTQAISRTCDKTRFPSLCVKSLLDFPGSAAASEQDLVHISLNMTLQHLSKALYSSTAISATQMNPLERSAYEDCLELLEDSVDGFLRSLTSGSTGGGSTDDVLTWLSAALTNLDTCSEGFADTSGTVKYQMASNLKDLSELISNCLAIYAGSDAGNDFSGVPIQNRRRLMGDNHNGDVSDEFPAWLSKRDRRLLATPAPSIQADIVVSKDGSGTVETIAEAIKKVPEHSSRRIVVYVKAGSYEEENLKVGRKKTNVMFVGDGKGKTIITGGRNYAQGTTTFHTASFAATGAGFIAKDMTFENYAGPGKHQAVALRVGADHAVVYRCSIVGYQDTCYVHSNRQFFRECDIYGTIDFIFGNAAVVFQSCNLVSRKPMDQQKNTITAQNRKDPNQNTGISIHNCRIQAASDLEAAKGSIPTYLGRPWKTYARTVYMLSYMGDHINPRGWLEWNATASVDKLYFGEYMNSGPGAAVGGRVKWPGYRVITSAVEASRFTVAQFIAGSSWLPSTGVAFVGGLSS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01134 591 NCBIfam pectinesterase inhibitor domain 62 222 IPR006501 GO:0004857
Accr3g01134 591 Pfam Plant invertase/pectin methylesterase inhibitor 77 221 IPR006501 GO:0004857
Accr3g01134 591 PANTHER PECTINESTERASE 45 579 - -
Accr3g01134 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 224 IPR035513 -
Accr3g01134 591 Pfam Pectinesterase 277 574 IPR000070 GO:0030599|GO:0042545
Accr3g01134 591 FunFam Pectinesterase 74 225 - -
Accr3g01134 591 SUPERFAMILY Pectin lyase-like 274 588 IPR011050 -
Accr3g01134 591 Gene3D - 271 589 IPR012334 -
Accr3g01134 591 SMART PMEI_2 73 221 IPR006501 GO:0004857
Accr3g01134 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 222 IPR035513 -
Accr3g01134 591 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Accr3g01134 591 MobiDBLite consensus disorder prediction 1 28 - -
Accr3g01134 591 MobiDBLite consensus disorder prediction 1 25 - -
Accr3g01134 591 FunFam Pectinesterase 271 589 - -
Accr3g01134 591 CDD PMEI-like_3 82 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01134 Accr-Chr3 12782966 12787186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01134 1 590 Carbohydrate Esterase AT5G53370 63.333 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01134 - - qsa:O6P43_015006 811.986