Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01120 ATGGCGCTCTGGAGTACTGGGCCAAACCGAACACTAGACGCTAATAGCTTAGCTTATTCAACCCGAAATTTGTCGACAAGACTTGTTGTACCTGTTCCCTTGCGTTTTATTGGGAAATTCTCTAATTTAAGCAGGAGACGACATGAAGGAGTTTGCTGTTCGTCATTAACGAAAGCCGCCTCTGCATCTTCTATGGAGTCACAAGATGCTCCCAGTGCTTTATCAGCGTCCGTGGAGGAAGAACTGGATCATGTTATGCGGTTCAAAATGTCAGACTTTAAGATTTTAGATCGCATTAGTGTTGGCCTTGGGGGGCGGGCGGATGAGGTAGTTTTTGAAGCCATTGTGATGGATGTTGGTAGCCCCTTATATAATACAAGAGTTGTACTTCTGCAACTATCGAGTGTGCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGTCGTAAACTTATGTATCATTCTTACTCATTGCAAGTACATGGCTATATCTCATTGCCTGCAAGTGAACATCGGGGCTCATTTATCCTTGTCCATGGGTATCATGGTAGTTTTTCTTTGAGGCATTGGCTTCAACAGTCAGATTGGCTTCCAACTTTAGAGGCCACCCTTGCACTGGATGAAGAGTCTGTTAGGAAGGTTGGAGAAGACACAACTGGAGGTCCTGCTGTTTCTAGGCAGCTGAGGATTATTCGCTTATTGATGAGGGATCTTTTAATTGGAGTAAATTACTTGCACAGCCATGGTCTTGCCCATACTGAATTGAGGCTAGAAAATTTGCATATAAGCCCTGTGGACCGACATATTAAAGTAGGTATATTGGGAAATGCTGCTGACTTTTATGAGGATGGTTCAGATGCTGGTTCAATGGACAGCATGGACCGGCGGCAAATGATGATTGCATTTGACATGAGATGTGTTGGTTTCATTATGGCAAAAATGGTGTTGCGGGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAAGCATTCCTCACAAAGGGGTATGATCCTTCATGTTTACGTGAGCTCATGTTGGAAATTGTTGGTGGGAATTCCTCATCTGGAAATGCTGGACTACAAATACTTGATAGGAACTGGGGTGCTGGTTGGCATCTTTTATCATTGTTGCTTGCAAATAATCCTTCTAAAAGGATAAGTTGTTTGGACGCTCTTAGACACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCGTCAATGGAAATTATTCGATGGGGTCTTGGGTCTACTGCAATGCGAATTACTGAGGAATACATTTATCGTCAGCCTCAGCGAAATAGGCTTGCCCACTTCATTGAGTTAATGGAGATGTTGAATCCTCACCCAAAGCCGAAGAACTGGCTGGAGCTGCTGCCAGGCAAATGGCGTCTCCTGTACTGCACTGGGAGGCATATCGGGCTCACCCTTCGTCAACCTCCTGCCCGTGTACTCATTAGAGATGTGCATCTTACTGTCAGTAGAGCATCAAAGTTGAAGGCTAACCTTTCATTCGTCTCTAACATTGGATTCACTGTCATGATTGGTCAGGACTGGCCTCATGACAAATCTGGTAAAAACGGGAGTTTGGAAGTGAAATCTTTATTTGGATTAAAGGCCGGGAGGCGATTATATCTGAAGCAAGAGGAGCAAGAGAAGTCCGCCGAGAAGTTCTCCTTCGGTCCTTCCAGCAGTGAGACAGACTTGGCTCAGAAGCTATCTGGCAAGAAATGGAGAAAAGTAATCCCCTTCAAGGAGTTTCCCTCAAGTCTTCCTGCAGCCAAGCTTGTAGCAGGTGATATCGATGTGTCTATGACTCTTGATGATCCATTGAATCAAGATGTTGGTACGGCAAGAAATGTGCTTCAAGAAGTAAGAATGCAGATTCCCCCCGAAATGTTTGATTTGTCCAAGTTGGTGTGTGGAACGTATGTGGATTCAAGGCTTCTTGTTCTTCGTGGGGTTAATGGTTCAGCTCTCGTATTTACAAGGACTTTTGTGAATGACAGTAGTTGCAGATAA 2040 0.4456 MALWSTGPNRTLDANSLAYSTRNLSTRLVVPVPLRFIGKFSNLSRRRHEGVCCSSLTKAASASSMESQDAPSALSASVEEELDHVMRFKMSDFKILDRISVGLGGRADEVVFEAIVMDVGSPLYNTRVVLLQLSSVQAQRRGKRAIEVLKKLVRRKLMYHSYSLQVHGYISLPASEHRGSFILVHGYHGSFSLRHWLQQSDWLPTLEATLALDEESVRKVGEDTTGGPAVSRQLRIIRLLMRDLLIGVNYLHSHGLAHTELRLENLHISPVDRHIKVGILGNAADFYEDGSDAGSMDSMDRRQMMIAFDMRCVGFIMAKMVLRELMDPLIFAKFKAFLTKGYDPSCLRELMLEIVGGNSSSGNAGLQILDRNWGAGWHLLSLLLANNPSKRISCLDALRHPFLCGPRWRVVPSMEIIRWGLGSTAMRITEEYIYRQPQRNRLAHFIELMEMLNPHPKPKNWLELLPGKWRLLYCTGRHIGLTLRQPPARVLIRDVHLTVSRASKLKANLSFVSNIGFTVMIGQDWPHDKSGKNGSLEVKSLFGLKAGRRLYLKQEEQEKSAEKFSFGPSSSETDLAQKLSGKKWRKVIPFKEFPSSLPAAKLVAGDIDVSMTLDDPLNQDVGTARNVLQEVRMQIPPEMFDLSKLVCGTYVDSRLLVLRGVNGSALVFTRTFVNDSSCR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01120 679 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 401 653 - -
Accr3g01120 679 Pfam PAP_fibrillin 437 668 IPR006843 -
Accr3g01120 679 ProSiteProfiles Protein kinase domain profile. 93 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01120 679 SMART serkin_6 93 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01120 679 Gene3D Transferase(Phosphotransferase) domain 1 229 405 - -
Accr3g01120 679 SUPERFAMILY Protein kinase-like (PK-like) 85 415 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01120 Accr-Chr3 12642464 12647596 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Accr3g01120 PAP_fibrillin 5.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01120 - - pcin:129302869 1232.24