Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01115 ATGCTGATGAACTCCAGAATTTGTTCGTGGAGCTTGGTACTCCTCTTGCTTATCCACATTGGGTGGTGCCAACAACGTCACTGTAAGGAATTAAGGTGCGGACGTCATGGCGTGGTTCGATTCCCCTTCCGACTCAAAGATAAGCACCCGGCCGAGTGCGGCTATCCTGGGTTTGATATCACCTGTTATCATCACCGCCACCTTCTCCTTCAACTGCCCACACCTTCAGGTTCCGTAGACCTCTTCATCAAACACATTGATTACCCATCCCAATCACTTCAAGCATACGACCCCCAAAATTGCCTTCCGGCCTTGTTACTCAAACTCCACAACTCCACGATATCACCCTTCAAATTTGAGTCAGCCACAGGATTCGAATCAGACATTACTTTCCTTAATTGCTCTTCAAACGGCCTAAACGGTTTCAGAAGCCGCTTTCAAAACATAGACATGTTCTCTTGCCCGATTTATGTTGGTTACTCCGAAATCGATTTCATGGCGGAGGACCTCCTATTCTGTACCAAGATGATCAATATTTCATCAAATCAGCTCGGTAACATATTGCAGAATAATGTTTTGTTCAGTTGGATGAAACCAAATTGTACTGGATGCGAAAGGAAGGGACAAATGTGTCAATTGATGAAGAATAAGGGCACAAAAGATGATATTGAATGTGTTGACCATGATCCCAAGATATCTAGATCAACCATTAAACTCATAGCAGGTCTAACCTCGGGTTCAGTTGTGCTGCTTCTGGTGCTCCTTGTACTCTGTCAATACTACAGATATTTGAGATTGAAAGAGGAAGATCTCGCGAGACTTCAAAAGTTTTTGGAAGACTATCGGTTGCTCAAACCAACCAGATTCACTTTTGTCGATCTGGAACGAATCACGTGTGGTTTTATAGAGAAGTTAGGTGAAGGTGCTCATGGAGCAGTGTTCAAAGGAAAGCTTTCCGATGAAATTTTGGTAGCTGTGAAGATGCTCAACAACTCAAAGGATGATGATGGCAGAGAGTTCATAAATGAAATGGGAGTTATAGCGAAAATCCACCATGTCAATGTGGTTCGCTTATTGGGCTTCTGTGCTGATGGAATTCACCATGCTCTTGTTTATGATTATTTTCCAAATGGTTCCTTGCAAAACTTCGTATCTGCTCCAAATGGCCATGGCTCATTCCTTGGCTGGGAAAAGCTGCAACAAATTGCTCTTAGTATAGCCAGAGGGATTGAGTATCTTCACCATGGTTGTGATCATCAAATTCTTCACTTTGATATTAATCCTCATAATATATTATTGGATGACAACTTCATTCCAAAAATCTCTGATTTTGGTTTAGCCAAGTTGTGTCCAAAAAATAAAAATACAGTGTCTGTGACAGCAGCAAGAGGAACTATAGGTTACATCGCTCCAGAAGTTTTCTTTAAAAATTTCGGAAATGTTTCCTACAAGTCGGATATTTACAGCTTTGGAATGTTACTGATAGAAATGGTAGGAGGAAGAAAGAATACAGACACAATTCAAGAAAAGTTTCAAGTTTTATATCCAGAATGGATTCATAGTCTGGTTGAAGGAGGTGACATACATATCCCAATAGAAAATGAAGAAGACATTAGAATTGCAAAGAGACTAGCTATTGTAGGACTTTGGTGCATTCAGTGGCATGCAATAAATCGTCCATCTATGAATAAGGTAGTGCAAATGTTGGAAGGCGACGAAGATAATAAGTTGGAAGTCCCTCCTACTCCATTTGACTCCTCTTCCATCAACACAACTATGGCAGCTCCGGCAAGGCATTTAGGCTTAGAGTTGGAAGTGATTCATGAATTGGAATGA 1836 0.4118 MLMNSRICSWSLVLLLLIHIGWCQQRHCKELRCGRHGVVRFPFRLKDKHPAECGYPGFDITCYHHRHLLLQLPTPSGSVDLFIKHIDYPSQSLQAYDPQNCLPALLLKLHNSTISPFKFESATGFESDITFLNCSSNGLNGFRSRFQNIDMFSCPIYVGYSEIDFMAEDLLFCTKMINISSNQLGNILQNNVLFSWMKPNCTGCERKGQMCQLMKNKGTKDDIECVDHDPKISRSTIKLIAGLTSGSVVLLLVLLVLCQYYRYLRLKEEDLARLQKFLEDYRLLKPTRFTFVDLERITCGFIEKLGEGAHGAVFKGKLSDEILVAVKMLNNSKDDDGREFINEMGVIAKIHHVNVVRLLGFCADGIHHALVYDYFPNGSLQNFVSAPNGHGSFLGWEKLQQIALSIARGIEYLHHGCDHQILHFDINPHNILLDDNFIPKISDFGLAKLCPKNKNTVSVTAARGTIGYIAPEVFFKNFGNVSYKSDIYSFGMLLIEMVGGRKNTDTIQEKFQVLYPEWIHSLVEGGDIHIPIENEEDIRIAKRLAIVGLWCIQWHAINRPSMNKVVQMLEGDEDNKLEVPPTPFDSSSINTTMAAPARHLGLELEVIHELE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01115 611 Pfam Protein tyrosine and serine/threonine kinase 301 568 IPR001245 GO:0004672|GO:0006468
Accr3g01115 611 Pfam Wall-associated receptor kinase galacturonan-binding 28 97 IPR025287 GO:0030247
Accr3g01115 611 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Accr3g01115 611 PANTHER RUST RESISTANCE KINASE LR10-RELATED 275 587 IPR045874 GO:0004672
Accr3g01115 611 FunFam serine/threonine-protein kinase PBS1-like 268 374 - -
Accr3g01115 611 Gene3D Phosphorylase Kinase; domain 1 274 374 - -
Accr3g01115 611 Gene3D Transferase(Phosphotransferase) domain 1 375 580 - -
Accr3g01115 611 ProSiteProfiles Protein kinase domain profile. 299 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01115 611 FunFam PR5-like receptor kinase 375 581 - -
Accr3g01115 611 SUPERFAMILY Protein kinase-like (PK-like) 283 570 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01115 Accr-Chr3 12558774 12560690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01115 33 583 Receptor kinase-like Gene Family AT1G66910 33.828 3.18e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr3g01115 PK_Tyr_Ser-Thr 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01115 - - gmx:100819302 632.869