Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01113 ATGAAGAATCTGAAACGTCACCTGCCGTCGCCCACGGCGGGCCTCCGGCAACTAGACTCTGATTCCAACTCCATGTGCCCTGACACTGTCATGAAATTGAAGAATGCTCGGCTGAGAAGACTTAAAATCCAGCGATTGAGGTTGAAGTATACCTGTGAAGCGAAAATCCATGTTGCCTCCGAAGATCGTGAGGAGGAGACCGGTTGTGCGGAGTCGGAGAGTAAAGGTAGGAAGATTCATGAATCGATGCAGATATCATTGTCGTTAACGACGGCGGCGTCGAAGGAGGAGGATGATCGGTCGAGTTTGGTGGTAAAGAACGGCGAGAAATACAAAGAGGATTGCTGTGGTGTGGAGGATTTATCTTACGGTTCGGTGTCGTTGATAGGTAGAAGGAAAGAGATGGAAGATGCCGTGAGCATAGAGGCGGGGTTTGTGGTGAGGGAGAGAACAAAGTGTGACTTCTTTGCGGTTTACGACGGCCACGGTGGGTCCCAGGTGGCGAAGGCGTGCCGGGAGCGATTGTACCAATTGGTGGCGGAGGAATTGGAGAGGCTTGGAAGGAATGGTGGCGAAGTGGATTGGGAGGCAATGATGGAAGGGTGTTTTGCTAAAATGGATAGCGAACTTGCGGATAATGCGGCAGTGCGGACGGTGGGATCTACGGCGGTTGTGGCCGTGGTGGGAAAGGATGAGGTGGTTGTGGCCAATTGCGGCGACAGTAGGGCGGTGATGGGAAGAGGAGGTGAGGCTTTCGCCTTGTCTGATGATCATAAGCCTGATAAGCCTGACGAGTTGATGCGAATAGAAGCCGCCGGTGGAAGGGTCATAAACTGGAACGGCCACCGCGTTCTAGGAGTTCTTGCCACGTCCAGATCTATTGGAGACCAACACCTTCGACCTTACGTAATATCAAAACCAGAAGTGACGGTGACGAAGAGAACTAACAAGGATGAGTTTCTTATACTGGCGAGTGATGGTTTGTGGGACGTGATGTCCAGTGAAGCTGCGTGTGAGGTTGTAAGGAAGTGTCTGAGTCGGCAAGGACGGCGGAATAATTATTCGTCGGAGCTTCAAAATCATCAAAGCCCGGCAAGTGAGGCGGCAGCTGTGTTAGCGGAACTAGCAATGGCAAAAGGAAGCAGCGATAACACAAGTGTGATAGTAGTTCAGCTCAGGAGCCACATTTATAATAACTAA 1200 0.5125 MKNLKRHLPSPTAGLRQLDSDSNSMCPDTVMKLKNARLRRLKIQRLRLKYTCEAKIHVASEDREEETGCAESESKGRKIHESMQISLSLTTAASKEEDDRSSLVVKNGEKYKEDCCGVEDLSYGSVSLIGRRKEMEDAVSIEAGFVVRERTKCDFFAVYDGHGGSQVAKACRERLYQLVAEELERLGRNGGEVDWEAMMEGCFAKMDSELADNAAVRTVGSTAVVAVVGKDEVVVANCGDSRAVMGRGGEAFALSDDHKPDKPDELMRIEAAGGRVINWNGHRVLGVLATSRSIGDQHLRPYVISKPEVTVTKRTNKDEFLILASDGLWDVMSSEAACEVVRKCLSRQGRRNNYSSELQNHQSPASEAAAVLAELAMAKGSSDNTSVIVVQLRSHIYNN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01113 399 MobiDBLite consensus disorder prediction 1 21 - -
Accr3g01113 399 SMART PP2C_4 112 390 IPR001932 -
Accr3g01113 399 Gene3D - 119 397 IPR036457 -
Accr3g01113 399 SMART PP2C_SIG_2 142 392 IPR001932 -
Accr3g01113 399 Pfam Protein phosphatase 2C 123 385 IPR001932 -
Accr3g01113 399 SUPERFAMILY PP2C-like 119 393 IPR036457 -
Accr3g01113 399 CDD PP2Cc 122 392 IPR001932 -
Accr3g01113 399 ProSiteProfiles PPM-type phosphatase domain profile. 122 392 IPR001932 -
Accr3g01113 399 PANTHER PROTEIN PHOSPHATASE 86 392 IPR015655 GO:0004722|GO:0006470
Accr3g01113 399 FunFam Protein phosphatase 2C 51 116 399 - -
Accr3g01113 399 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01113 Accr-Chr3 12542960 12545577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01113 123 393 PP2C-type Phosphatase Gene Family AT1G07430 46.855 5.45e-90 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01113 K14497 - gmx:100807235 415.231