Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01111 ATGAATGTGCAAGAGAAGTTTGTGAGGTTTCGGGATTGGAGTTCAGACAAGGGTTCTGAAAGTCAGTATTCTGAAAATTCCAGAACCCACCCAGGGAGAATAAGAAGCACGCTAAATTCAATTTCATCTAAGTTTCAAAGAGGATTTGAATCTGGTTCTGAGAGTATAAAGAGATTTAGAAAATCATTCAAATCTTTTACCTTTGACAGTCAATTCTGCCGGAGTTTCGATTCTAGAAAGAAAATCCTTGATCCACAAGGCCCATTTCTTCAGAAGTGGAACAAGATATTTGTGTTATCATGTATTATTGCTGTATCACTAGATCCTCTATTCTTTTATGTCCCTGTCATTAATGATGAGAAGAAATGCCTTTCGCTCGACAACAAGATGCAGATAACAGCCACTATTTTAAGATCTTTCTCAGATATCTTTTACATAGTCCACATAATTTTCCAATTTCATACTGGATTTATTGCACCATCTTCTCGAGTATTTGGAAGGGGTGTTTTGGTTGAAGATGCTTGGGCAATAGCAAAGCGGTATTTGGCATCATACTTCTTTGTTGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTGATTTTAATTGTAATTCCAAAGATGGGACGCTTTAGATCGTTGAACACAAAGAACTTGCTGAAATTTGTTGTTTTCTTCCAATATGTGCCAAGGGTTTTACGAATTATTCCATTATATAAAGAAGTGACAAGGACCTCTGGCATCATCACTGAAACTGCTTGGGCTGGAGCTGCATTTAATCTCTTTCTTTACATGCTTGCGAGTCATGTTGTAGGTGCTTTTTGGTACTTGTTTTCTATAGAAAGAGAGACAACATGCTGGCATGACGCATGTCTAAGAAATACTACCACCTGCAACAAGGCATATTTGTATTGTGACACAAGTCAAGGGTTGAGCAGTATTGCAACATTCTTGAATGCTTCTTGCCCAATAGTGGAGGATTCAGAGAAATTCAATTTCGGAATATTTCTTGATGCTCTTCAATCTGGTGTTGTGGAGTCAAGAGATTTCCCTCAGAAGTTTTTTTACTGCTTTTGGTGGGGCCTCAGAAATCTAAGTTCTCTTGGTCAGAACCTGGGAACAAGTACCTTTGTCTGGGAGATTTGCTTTGCAGTTTTCATATCCATCTTTGGTTTGGTGTTGTTTTCGTTTCTCATTGGAAACATGCAGACATACTTGCAATCAACAACCACAAGATTAGAAGAAATGAGAGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCACCGACTACTCCCAGATAGTTTAAGAGAGAGAATTAGACGGTATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAAGATAATTTGATCAATAATCTTCCCAAGGATTTGAGAAGGGATATTAAGCGCCATCTTTGCTTGGCTCTGCTGATAAGAGTGCCAATGTTTGAGAAAATGGATGAACAACTGTTGGACGCAATGTGTGACCTACTCAAGCCAGTGCTTCACACTGAAAACAGTTTCATTGTTCGGGAAGGAGACCCTGTCAGTGAGATGCTCTTCATAATGAGAGGCAAGCTGTTGACTATGACTACCAATGGTGGGAGAAGAGGCTTCTTCAACTCCGAATACCTCAAGGCCAGCGATTTCTGTGGAGAAGAGCTTCTCACATGGGCTCTGGACCCACATTCCTCGTCCAATCTTCCCATCTCAACCAGGACTGTTCAAACCCTTTCAGAAGTTGAAGGCTTTGCTCTAAAAGCCGATGACTTGAAGTTCGTGGCATCACAGTATCGACGTCTTCATAGTAAGCAGATCCGCCATACTTTCAGGTTCTACTCGCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCATGGCGCCGCTATATTAAGAAGAAGCTTGAAGAGTCTCTCCGGGAAGAGGAGGATAGGCTGCAAAATGCTCTGGCCAAGGCAGGTGGTAGCTCTCCTAGTTTAGGTGCCACAATATATGCCTCTAGATTTGCTGCTAACGCACTTAGAGCTTTACGCCGAAATAGATCTAGGAAGGCGAGGGTACAGGAGAGACTACCACCCATTCTGCTTCAGAAGCCTGCTGAACCTGACTTTACTGAAGAGCAATAG 2142 0.4169 MNVQEKFVRFRDWSSDKGSESQYSENSRTHPGRIRSTLNSISSKFQRGFESGSESIKRFRKSFKSFTFDSQFCRSFDSRKKILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYVPVINDEKKCLSLDNKMQITATILRSFSDIFYIVHIIFQFHTGFIAPSSRVFGRGVLVEDAWAIAKRYLASYFFVDILAVLPLPQVVILIVIPKMGRFRSLNTKNLLKFVVFFQYVPRVLRIIPLYKEVTRTSGIITETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWHDACLRNTTTCNKAYLYCDTSQGLSSIATFLNASCPIVEDSEKFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLGTSTFVWEICFAVFISIFGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEDNLINNLPKDLRRDIKRHLCLALLIRVPMFEKMDEQLLDAMCDLLKPVLHTENSFIVREGDPVSEMLFIMRGKLLTMTTNGGRRGFFNSEYLKASDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEGFALKADDLKFVASQYRRLHSKQIRHTFRFYSQQWRTWAACFIQAAWRRYIKKKLEESLREEEDRLQNALAKAGGSSPSLGATIYASRFAANALRALRRNRSRKARVQERLPPILLQKPAEPDFTEEQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01111 713 Gene3D - 95 409 - -
Accr3g01111 713 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Accr3g01111 713 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Accr3g01111 713 ProSiteProfiles cAMP/cGMP binding motif profile. 485 569 IPR000595 -
Accr3g01111 713 Coils Coil 637 657 - -
Accr3g01111 713 Gene3D Helix hairpin bin 411 476 - -
Accr3g01111 713 Pfam Ion transport protein 93 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr3g01111 713 SUPERFAMILY cAMP-binding domain-like 414 607 IPR018490 -
Accr3g01111 713 MobiDBLite consensus disorder prediction 687 713 - -
Accr3g01111 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 709 - -
Accr3g01111 713 Gene3D Jelly Rolls 483 603 IPR014710 -
Accr3g01111 713 SMART cnmp_10 485 616 IPR000595 -
Accr3g01111 713 CDD CAP_ED 485 604 IPR000595 -
Accr3g01111 713 SUPERFAMILY Voltage-gated potassium channels 84 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01111 Accr-Chr3 12509621 12516587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01111 4 712 Ion Channels AT5G53130 77.139 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01111 K05391 - gmx:100801032 1161.36