Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01109 ATGGTTTACAGCAGTTGTATAAGGTCTTTGGTAGTTCAAGTTGGATCCTTCACCAATAAAGTGCAATTCTACAACAGTGTGAGAAGTCTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTAATACAGGTGCTATGTCAAACGCGGGACCCATTGTTGATATGTTGCCAGAGAAAGATGATGATGGTGGGTTTGCCAGTGGGGGGTGTAAAAGTGAAGATGGAAGACTTCGCTATGGGTATTCAAGTTTTAGAGGAAAAAGGGTCACCATGGAGGATTTTTATGATATAAAGATATCGAATATTGATGGTCGATCAGTATGCTTGTTTGGAATATTTGATGGTCATGGGGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTTACTGATACCAAATTGGCTATAAGTGAAACTTACCAACAGACTGATGCTGATTTTCTGGATTCTGAAAAGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACCGCAGTTTTGGTTGATAACCACCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTTGCAATGTCCCGTGCTTTCGGTAACCGTATGCTGAAGCAATATGTTGTGGCAGAACCTGAGATCCAGGAACAGGTGATAGACGAAGAGCTGGAGTTGCTGCTACTTGCAAGCGATGGACTATGGGATGTAGTACCGAATGATGACGCTGCTTCGCTTGCTCGTGCTGAAGATGAACCCGAAACAGCTGCTCGTAGGCTAACTGAAGCCGCCTTTAGTCGGGGCAGTGCAGATAACATAACATGCATTGTGGTACGCTTCCATCATGATAAAGCAAGCCCAGCTAATTCTGAGGAAGCAGGTTCAGGATCCAGCTAG 1062 0.4379 MVYSSCIRSLVVQVGSFTNKVQFYNSVRSLHKVPSITYSWNRGFKTSIGMMVNTGAMSNAGPIVDMLPEKDDDGGFASGGCKSEDGRLRYGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFFTDTKLAISETYQQTDADFLDSEKDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQYVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPETAARRLTEAAFSRGSADNITCIVVRFHHDKASPANSEEAGSGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01109 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Accr3g01109 353 CDD PP2Cc 89 335 IPR001932 -
Accr3g01109 353 Pfam Protein phosphatase 2C 89 328 IPR001932 -
Accr3g01109 353 Gene3D - 80 352 IPR036457 -
Accr3g01109 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Accr3g01109 353 SMART PP2C_4 79 333 IPR001932 -
Accr3g01109 353 PANTHER PROTEIN PHOSPHATASE 77 335 IPR015655 GO:0004722|GO:0006470
Accr3g01109 353 SMART PP2C_SIG_2 71 335 IPR001932 -
Accr3g01109 353 FunFam Probable protein phosphatase 2C 76 81 341 - -
Accr3g01109 353 SUPERFAMILY PP2C-like 86 336 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01109 Accr-Chr3 12488686 12492507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01109 1 339 PP2C-type Phosphatase Gene Family AT5G53140 70.085 1.49e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01109 K17506 - gmx:100805795 542.347