Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01108 ATGGTTTACAGCAGTTGTATAAGGTCTTTGGTAGTTCAAGTTGGATCCTTCACCAATAAAGTGCAATTCTACAACAGTGTGAGAAGTCTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTAATACAGGTGCTATGTCAAACGCGGGACCCATTGTTGATATGTTGCCAGAGAAAGATGATGATGGTGGGTTTGCCAGTGGGGGGTGTAAAAGTGAAGATGGAAGACTTCGCTATGGGTATTCAAGTTTTAGAGGAAAAAGGGTCACCATGGAGGATTTTTATGATATAAAGATATCGAATATTGATGGTCGATCAGTATGCTTGTTTGGAATATTTGATGGTGAAACTTACCAACAGACTGATGCTGATTTTCTGGATTCTGAAAAGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACCGCAGTTTTGGTTGATAACCACCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTTGCAATGTCCCGTGCTTTCGGTAACCGTATGCTGAAGCAATATGTTGTGGCAGAACCTGAGATCCAGGAACAGGTGATAGACGAAGAGCTGGAGTTGCTGCTACTTGCAAGCGATGGACTATGGGATGTAGTACCGAATGATGACGCTGCTTCGCTTGCTCGTGCTGAAGATGAACCCGAAACAGCTGCTCGTAGGCTAACTGAAGCCGCCTTTAGTCGGGGCAGTGCAGATAACATAACATGCATTGTGGTACGCTTCCATCATGATAAAGCAAGCCCAGCTAATTCTGAGGAAGCAGGTTCAGGATCCAGCTAG 963 0.4424 MVYSSCIRSLVVQVGSFTNKVQFYNSVRSLHKVPSITYSWNRGFKTSIGMMVNTGAMSNAGPIVDMLPEKDDDGGFASGGCKSEDGRLRYGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGETYQQTDADFLDSEKDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQYVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPETAARRLTEAAFSRGSADNITCIVVRFHHDKASPANSEEAGSGSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01108 320 ProSiteProfiles PPM-type phosphatase domain profile. 89 302 IPR001932 -
Accr3g01108 320 SUPERFAMILY PP2C-like 86 303 IPR036457 -
Accr3g01108 320 Pfam Protein phosphatase 2C 129 295 IPR001932 -
Accr3g01108 320 PANTHER PROTEIN PHOSPHATASE 78 302 IPR015655 GO:0004722|GO:0006470
Accr3g01108 320 SMART PP2C_4 79 300 IPR001932 -
Accr3g01108 320 Gene3D - 80 319 IPR036457 -
Accr3g01108 320 CDD PP2Cc 89 302 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01108 Accr-Chr3 12488686 12492507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01108 1 306 PP2C-type Phosphatase Gene Family AT5G53140 61.823 1.61e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01108 K17506 - gmx:100805795 466.848