Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01107 ATGATGGATTGCAACAAAGATGAGGCTGTTAGGGCCAAGGAAATAGCAGAGAAGAAATTTTCAGACAGGGAATATGCTGGTGCTAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGATGGTCTTTCACAGTTTTTGACCAACCTTGATGTTTATATCTCTGCTGAGAATAAAGTTAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAACCCCTTTGATGATGAAGAGACAGTTAGAAAACAGTACAGGAAGCTGGCTCTTACTCTTCACCCAGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTGTCGGATAAAACCAAGAGACTAGAATATAACCTGAAGAGGAGTTTGAAAGGTTTTCAACATAAAACTCCCAACCATGCTGGATCTCAATCAGAAGTACCTGGTTCAAATGGTTTTTATAATTTTAACAAGAATGTAACTTCAAATGTGAGGGCTGGAAATAGTAATGCCCAGGCACGCCATGCCTCAGCTCCTCGTCCACAGAAAAAGGCTGACACGTTTTGGACTGTTTGTAATCGATGCAGGACTCATTATGAATACCTTAGGGTCTATTTGAATCATAGACTTCTATGTCCCAATTGTAATGAGGCTTTCTTGGCTATAGAGAAGGAGCCACCTCCCAACTATTTCAAGTCAACAAACTGGTCTTCTCGTCAGCAGCATCAGAGTTCTCGACATCATGCTTCAAGTAATAATCAAGCCAATGCAGGAAAAAATCATACAGTTCCTCAAAATTTGGAAGCCGGTGGTGCTTCAGGCATGTCGTCATATGGTAAAACAAATTTTCAGTGGGGCCCTCACTCTAGCATGGCTGGTTTTGGTGGTGTGGATGGATCATCATCTGTTGCTGCTCAAGCTGCAAGTGTTGTGCAACAGGCTAGTGAGAAAGTCAGAAGAGAGAGAGAGGGAGCACCGTCTATTGCTGAATGGGAGAGAAGTCAAATGTCTAAGAGGGCTGATGGTTCTTTTCATAAAGTGGAGAAACCTTGGAAGAGGAGGAGGACAGACGATGCTGGTATGAATGGTATTAAAGGATACATGGCAAACCATATGACCATGGGCCAAGGAGCAGCTGGTACGGGATATGCTTCTGATCCAAGAAAAGCTAACTGGGAAACTGAAAGAAGCTATGGTTTTTCAGGCATGAAGCCTAACAGTACGAGAGAGTTGTCATTGTTTGAAATCCGAAATATGTTGGTGGACAAAGCACAAAGTGAAATTCGTAAGAAACTTGAAGAATGGAAATTAGCTCAATCTAAGATCACAAGCAAGTCCAAAGAGAGTAAGAGACAAAAAAGCGCAATGACTGGTAAAACATCTGATCCGAAGAAACATAGAGAGTCCATTCTTAATAATAGCAGTCAAGTAGAAGCTGATTCTTTCCCTGATGCATCTGATAATGCGGTTAAGGAGGATCAATCCTACATCATAATGAATGTTCCTGATCCTGATTTCCACAATTTTGACTTGGATAGAACTGAAAATGCATTTGGTGAGGACCAGGTCTGGGCTGCTTACGATGATGATGATGGAATGCCCCGTTATTATGCTCGAATTCATAAGGTGATATCCATGGAGCCATTTAGAATGCGAATAAGCTGGCTTAACTCTAGAAGCAACAGTGAATTGGGTCCTATAGATTGGATAGGTGCTGGTTTTACTAAAACTTGTGGGGACTTTAGGACTGGCAGGCATGAAATAACCGAGTCATTAAATTCATTCTCACACAAGGTTAGGTGGACAAAAGGCACCAGGGGGGTCATTCGCATCTTTCCCTTGAGAGGGGAAGTATGGGCTCTTTATAAGGACTGGTCTCCTGATTGGGACGAACAGACTCCAGACGAAGTGATACACAAATATGATATGGTGGAGGTGCTTGAAGATTTTGACGAGGAGCTTGGGGTATTAGTTGCCCCATTGATCAAGCTTCGGGATTTCAGGACTGTGTTTAGAAGGCATGCTGACCCTGATCGTGTGACCAAGATTCCTAAAGGGGAGATGTTTCGCTTTTCACACCAGGTTCCTAATTACATGCTTTCAGGCGAAGAAGCTGATAATGCTCCCAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTTCTTCAACCCACTACGGAACCTAACGAGGGATCGGGTGCTGAAAGGCCAGTCAAAGACGCTTTGCCCAATTCAAATGAAATGGAGAAAGCTTTAGAAACAAGAGGAGGGGAACAATTGAACGAGATTTTTACATAG 2316 0.4288 MMDCNKDEAVRAKEIAEKKFSDREYAGAKKFALKALNLYPALDGLSQFLTNLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNFNKNVTSNVRAGNSNAQARHASAPRPQKKADTFWTVCNRCRTHYEYLRVYLNHRLLCPNCNEAFLAIEKEPPPNYFKSTNWSSRQQHQSSRHHASSNNQANAGKNHTVPQNLEAGGASGMSSYGKTNFQWGPHSSMAGFGGVDGSSSVAAQAASVVQQASEKVRREREGAPSIAEWERSQMSKRADGSFHKVEKPWKRRRTDDAGMNGIKGYMANHMTMGQGAAGTGYASDPRKANWETERSYGFSGMKPNSTRELSLFEIRNMLVDKAQSEIRKKLEEWKLAQSKITSKSKESKRQKSAMTGKTSDPKKHRESILNNSSQVEADSFPDASDNAVKEDQSYIIMNVPDPDFHNFDLDRTENAFGEDQVWAAYDDDDGMPRYYARIHKVISMEPFRMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRTGRHEITESLNSFSHKVRWTKGTRGVIRIFPLRGEVWALYKDWSPDWDEQTPDEVIHKYDMVEVLEDFDEELGVLVAPLIKLRDFRTVFRRHADPDRVTKIPKGEMFRFSHQVPNYMLSGEEADNAPKGCRELDPAATPLDLLQPTTEPNEGSGAERPVKDALPNSNEMEKALETRGGEQLNEIFT 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01107 771 PRINTS DnaJ domain signature 103 123 IPR001623 -
Accr3g01107 771 PRINTS DnaJ domain signature 69 87 IPR001623 -
Accr3g01107 771 PRINTS DnaJ domain signature 87 102 IPR001623 -
Accr3g01107 771 PANTHER BNAC03G44070D PROTEIN 2 724 - -
Accr3g01107 771 MobiDBLite consensus disorder prediction 708 751 - -
Accr3g01107 771 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Accr3g01107 771 MobiDBLite consensus disorder prediction 443 474 - -
Accr3g01107 771 Gene3D DnaJ domain 64 177 IPR036869 -
Accr3g01107 771 Pfam Domain of unknown function (DUF3444) 501 707 IPR024593 -
Accr3g01107 771 MobiDBLite consensus disorder prediction 443 489 - -
Accr3g01107 771 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Accr3g01107 771 SMART dnaj_3 66 123 IPR001623 -
Accr3g01107 771 Pfam DnaJ domain 67 128 IPR001623 -
Accr3g01107 771 CDD DnaJ 67 120 IPR001623 -
Accr3g01107 771 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Accr3g01107 771 MobiDBLite consensus disorder prediction 234 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01107 Accr-Chr3 12480093 12482408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01107 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 1.17e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01107 - - cam:101501612 1040.41