Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01106 ATGAAATTCATGTTGCTTCTCATTGTCACTTTCAAGATTATCAAGAAGAAGCTAAGCAAGCTGCAAGGGGCAATGGGATTCCAAACACCCCATTCAAGTAAACCCACCAAAGTGCAAGTTGCCAAACCCATTCCCTCGTCCTACGATTCATGGATGGCGAGGCATCCTTCAGGGTTGCGTTCATTTGATAGATTGATGAAAGCAGCAAGTGGGAAGGACATGGTTGTGTTTTTAGACTATGATGGAACCTTATCACCTATTGTAAATGACCCTGACCGTGCTTTTATGTCTGAGGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAAAAATTTCCCAACTGTAATCATTAGTGGAAGAAGCAGAGACAAGGTTAAAGACTTTGTGAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATAATGGTACCATCAGTGCCAGCTAGATCTTCTGATGGCGACCACTATAACATGGCCCTCGACACCACAAAGGACAATGGAGTTCCCTTTCAACCAGCGAAGAAATTTTTGCCTGCAATTCGAGAGATATTGAAACTGTTGGAGAATAAAATCAAAGGCATACAAGGTGCAAGGCTAGAGGACAATGGATTCTGCATTTCTGTACACTTCCGGCAAGTTCAAGAAAAGGACTATGTTGAATTAGAAGAGAGGGTGAAGTCTGTGCTTGAAAAACATCCAGACTTTTGCTTAACTGAGGGTAAAAAGGTTCTGGAGATAAGGCCATCAATAGAATGGAACAAAGGTCATGCACTGGAATATTTTCTGGACACACTAGGGTTAAGCAGTTCCAGCAATATCCTTCCTGTGTACATCGGCGATGATCGAACCGATGAAGATGCTTTTAAGGTGATAAAAAAGAGAGGACAAGGCTATCCAATTGTAGTGTCTTCAATTCCAAAGGACACAAAAGCTCTGTATTCTCTGCGAGACCCATCAGAAGTGCTAATTTTCTTGTCACGTCTGGCGAAATGGAGGCAGCCCATTATTGGCTCCAATTAA 1026 0.423 MKFMLLLIVTFKIIKKKLSKLQGAMGFQTPHSSKPTKVQVAKPIPSSYDSWMARHPSGLRSFDRLMKAASGKDMVVFLDYDGTLSPIVNDPDRAFMSEEMRAAVCEVAKNFPTVIISGRSRDKVKDFVKLNNVYYAGSHGMDIMVPSVPARSSDGDHYNMALDTTKDNGVPFQPAKKFLPAIREILKLLENKIKGIQGARLEDNGFCISVHFRQVQEKDYVELEERVKSVLEKHPDFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIKKRGQGYPIVVSSIPKDTKALYSLRDPSEVLIFLSRLAKWRQPIIGSN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01106 341 NCBIfam trehalose-phosphatase 72 332 IPR003337 GO:0003824|GO:0005992
Accr3g01106 341 NCBIfam HAD-IIB family hydrolase 76 295 IPR006379 -
Accr3g01106 341 CDD HAD_TPP 75 323 - -
Accr3g01106 341 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 335 IPR044651 GO:0004805|GO:0005992
Accr3g01106 341 FunFam Trehalose 6-phosphate phosphatase 180 337 - -
Accr3g01106 341 SUPERFAMILY HAD-like 75 334 IPR036412 -
Accr3g01106 341 Coils Coil 213 233 - -
Accr3g01106 341 Gene3D - 74 154 IPR023214 -
Accr3g01106 341 Gene3D - 173 337 IPR023214 -
Accr3g01106 341 Pfam Trehalose-phosphatase 77 321 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01106 Accr-Chr3 12458599 12460634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01106 72 331 Trehalose Biosynthesis Gene Families AT4G17770 25.641 1.44e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01106 K01087 - gmx:100809194 492.656