Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01097 ATGGACAAGGTCAACATGGGAGAGTGGGAAAGTAGGCTTATCAATGAGCTCATACAAGGCAGGGAGCTGGCGAGGCGACTTCAGATGTGCCTCCACGCGCCGTCGTCTTCCCAAGAAACCCCCGACTTCTTGATCCAGAGCATCATAGCCGCATTTGAAAGGGCACTCGCTACGGTAAACTTCCATGGTGGGTCGTCGTCGGTGGGTGAACCGTCAAACCCCACTCGGGTCGGACTCCCAACTTCTGAGTCACCACCTTTTAGTGGCAGTCCTCGCAGCGAAGACTCCGACAGAGATTTCCAAGACCAGAATGCCTCCAGAAATAGAAGAAGCATGCCAAGGTGGACAAAGCAGATCAGAGTTAGCCCAGGGATGGCAGTGGAAGGCACTCTTGACGATGGATATAGCTGGAGAAAATATGGCCAGAAAGATATTCTGGGAGCCAAGTTTCCCAGAGGCTATTACAGATGCACCCATAGAAATGTTCAGGGATGCTTGGCCACGAAGCAAGTGCAAAGATCTGATGAAGACCCCAATATATTTGAAATCACCTACAGAGGGAAGCACACCTGTGCACAGTCCTCATACATTGCGGTTCCTCCATCTGGCCCTCAAGAAACCCATGAACTGAATCATCCAAACGCTGCAGATCCTCATCAGGAACAGCTACTTGTCAACCTTCGAGCTGGCCTCAGAGTCCAAACCGACAACCTAGATATTCCCGATCCACAGCAATCATCGTTTACCTCACTTATTTTAGGTTCAACTTCCTCCATTTTGAATCACCAAAACCAAATGTTTACAAGCTCCTCCATGTTGGAAAGCAATTTTGCCGAAAACCTTACTTCTTCTTATCCTTCCTATATGTCCCCAGCCACATCGGCAATAACCTACTTTTCAGCCAATAACATGTCCTTGGCTGAGATGCCAAATATGGCAACTTCTGGGCCTGAGATCAACGACACAATCTCGGCCGTTACTTCCGCCGCAAACTCCCCAACCGTTGGTTTTGACCTGCCTTTTGATCAGTTCGGATATGACGGCCACAACTTCACCTTCGATAACCACCGACTCTTCTAA 1080 0.4907 MDKVNMGEWESRLINELIQGRELARRLQMCLHAPSSSQETPDFLIQSIIAAFERALATVNFHGGSSSVGEPSNPTRVGLPTSESPPFSGSPRSEDSDRDFQDQNASRNRRSMPRWTKQIRVSPGMAVEGTLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPNIFEITYRGKHTCAQSSYIAVPPSGPQETHELNHPNAADPHQEQLLVNLRAGLRVQTDNLDIPDPQQSSFTSLILGSTSSILNHQNQMFTSSSMLESNFAENLTSSYPSYMSPATSAITYFSANNMSLAEMPNMATSGPEINDTISAVTSAANSPTVGFDLPFDQFGYDGHNFTFDNHRLF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01097 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 271 IPR044810 GO:0003700
Accr3g01097 359 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01097 359 MobiDBLite consensus disorder prediction 63 115 - -
Accr3g01097 359 FunFam WRKY transcription factor 53 117 194 - -
Accr3g01097 359 Gene3D WRKY domain 121 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01097 359 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01097 359 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01097 359 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01097 359 MobiDBLite consensus disorder prediction 63 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01097 Accr-Chr3 12369386 12370652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01097 7 199 WRKY Transcription Factor Family AT5G24110 45.918 1.30e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g01097 WRKY 9.8e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01097 - - gmx:100776906 348.206