Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01091 ATGGAACAGAGTATCCTATGCAAATACACTGTCCACGAAAGTGTCACCAAGAAGTACACCAAGCCGGTGGCCGCCAACAAGGCTTCCGATATTCACTGTCCCTTTGAGCCCAGGGTGGTACGGATATCCGTCACCGATCCGGACGCCACCGACTCATCCAGCGACGACGAAGGAGAGTTCTGCTTCAGTCGTCAGAGAGTTAAGCGTTATGTGAACCAGGTCAACATCGAGCCGAGCTGTAAGAGCGCGGTGACTTCCAATCCGCGAAAGAGGCCCGCCGGAGAAACTCAAGCCTGCCGGCGGCCGGTGAAGGTTTCTTCTACTAATAACGGAAGGAAGTTCAGAGGAGTACGACAAAGACCCTGGGGGAAATGGGCGGCGGAGATTCGAGATCCCGCTCGTCGTGTGCGCGTGTGGTTGGGCACATTCGACACTGCGGAGGAAGCAGCCATAGTTTATGACAATGCAGCGATCAAGATACGCGGACCAGACGCGTTGACAAACTTCGTTACCCCACCACCGAGGGAAAAGCCGGAAGAAGTAGAAGTGGTGGTGAAGCCGGAAATCAATGTGGTGGTGAAGTCAGAAGCGTCAGGCTCCGGCTACGATTCCGGCGACGAATCACATCGTCTGCCATCTCCCACCTCCGTGCTGCAATTCAGAAGCAACTGCAGCGAAGAGACCGAACCCCAGAGGGCAAGCGAACCGGAGAAAGAAAGTGAGGCGGAGACAGAGGCGGCCGAAGTGGAAGATGTGTTCCGGGAGTGTGAAGGCGAGACGAGTCAGTCAGACGAGAGGGTGGACTTGTTCGGGTTCGACATGCCAAATTGGGAGCAGGTGTTCGATTTCTCAACGCCAGAACCAGAATACTCATTACTGTTCGAAGAACCTCCTCCGTTCCTGGGGGAGACTTCGATGTTGGCAGAGGAAGATTTCAGAGTGGAGGATCTGTTGGTGGGGGATTCAGATTTTGATCTGGAGAAATCATTCTCGCCCTCGAACCTGTGCCAAATGGACGATTACTTCCAAGACATATTGTCCGGTTCGGACCCTCTGGTGGTGCTGTGA 1068 0.544 MEQSILCKYTVHESVTKKYTKPVAANKASDIHCPFEPRVVRISVTDPDATDSSSDDEGEFCFSRQRVKRYVNQVNIEPSCKSAVTSNPRKRPAGETQACRRPVKVSSTNNGRKFRGVRQRPWGKWAAEIRDPARRVRVWLGTFDTAEEAAIVYDNAAIKIRGPDALTNFVTPPPREKPEEVEVVVKPEINVVVKSEASGSGYDSGDESHRLPSPTSVLQFRSNCSEETEPQRASEPEKESEAETEAAEVEDVFRECEGETSQSDERVDLFGFDMPNWEQVFDFSTPEPEYSLLFEEPPPFLGETSMLAEEDFRVEDLLVGDSDFDLEKSFSPSNLCQMDDYFQDILSGSDPLVVL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01091 355 MobiDBLite consensus disorder prediction 209 227 - -
Accr3g01091 355 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 37 261 - -
Accr3g01091 355 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Accr3g01091 355 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Accr3g01091 355 MobiDBLite consensus disorder prediction 247 262 - -
Accr3g01091 355 SUPERFAMILY DNA-binding domain 113 170 IPR016177 GO:0003677
Accr3g01091 355 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Accr3g01091 355 CDD AP2 113 169 IPR001471 GO:0003700|GO:0006355
Accr3g01091 355 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Accr3g01091 355 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
Accr3g01091 355 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Accr3g01091 355 FunFam Ethylene-responsive transcription factor 2 112 171 - -
Accr3g01091 355 PIRSF PTI6 220 297 IPR017392 GO:0003700
Accr3g01091 355 PIRSF PTI6 4 230 IPR017392 GO:0003700
Accr3g01091 355 MobiDBLite consensus disorder prediction 196 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01091 Accr-Chr3 12276490 12277557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01091 7 323 AP2-EREBP Transcription Factor Family AT4G27950 43.789 3.99e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr3g01091 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01091 - - pcin:129303306 537.724