Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01088 ATGGGCAAGGAAATGAACCTGTTGATAACTTTATCAGCAGCTTTCATCACTGGGGCAATTTTCGGAAGTGTTGGCGCTGAACCAGTGGAAGATAAAAAAGCGTTGCTTGATTTCTATCGCAATATTGGTCAGTCTCATCCTCTTAACTGGGATGAGAATTCCTCTGCATGCAACAGCTGGAGAGGAGTGTTCTGTAACAGTGAACAATCCAGAGTCATAGCACTCCATTTACCGGGAGCTGGGTTGAGTGGTCCAATCCCATCTAATACTCTTAGTCGTCTCTCAGAACTTCAAACTTTGAGTCTTAGATCCAACAGACTAACGGGTCCTTTTCCTTCTGATTTCTCTGAGCTTAAAAATTTGAGCTTTGTTTATCTCCAGTTCAACAAGTTTTCTGGTCCATTACCATCGGATTTTTCTGTTTGGAGTAATCTTACTGCTGTCAATTTGTCCAATAATTCTTTTAATGAAAGCATCCCTTCTTCCATTGGAAAATTGACTCATCTCACATCTTTAGTCTTAGCCAACAACTCTCTCTCAGGCGAAATTCCTGACATCGATATTCCTAGCCTAGAAGAGCTCAATTTAGCCAACAACCACCTTAGTGGGGTTGTGCCTAAATCCCTCGAGAGATTTCCAAATTCAGCTTTTGCTGGTAACGACAATCTTACAACAGAAAATACACCTCCTCCAGCTGTTCCAATTGAACCACCAACTGCTCCACAGAAAATGAAAACCACACTAAGCGAGCCTGTATTGTTAGCTATTATCATTGGTGGCTGTGTGATATTGTTTCTGGTGACTGCAGCTTTCATGCTTATCCGCAGCTATCAGAATGAACATGAACAAGTGCCAGCAGTGAAGTCAAAGAAAAAGGAAGAGTCACTGAAAAAAGAAGCATCTGATGAAACTGAAAGTCAAGACAAGAACAAGATAGTGTTCTTTGAGGGTCGCCGTCTTGCCTTTGACTTGGAAGACCTGTTGCGGTCATCTGCTGAGGTACTAGGAAAAGGAAGCTTCGGGACAGCATATAAGGCCGCTCTAGACGATGTAACCACGGTGGTGGTGAAGAGATTGAAGGAAGTGGTGGTCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTGGTGGGGAGGATCAGGCACGATAATGTGGCTCCACTGAGGGCATATTACTATTCTAAGGAAGAGAAACTCATGGTGTATGATTATTTTGAACAGGGTAGCGTTTCTGCAATGTTGCATGGTAGAAAAGGGGAAGGCAGGGTTTCTTTAGACTGGGATAGCCGGATGAGAATTGCAATAGGAGCAGCAAGAGGGATGGCTCACATCCACACACAACATGGAGGGAAACTAGTACATGGGAACCTAAAAGCCTCAAACGTCTTCTTAAACTCTCAAGGATATGGCTGTGTATCTGATGCAGGTTTGGCCACGTTAACAAGTTCAGTACCCTTACCGGCACAGAGAACTGGAGGGTACCGTGCACCGGAAGTAACAGACATCAGAAAAGCGAGCCACGCAGCTGACGTATACAGTTTCGGGGTGCTGGTGCTTGAGCTTCTGACTGGGAAATCACCCATACACGCCACGGGGAGCGAGGAGGTGGTGCATCTGGTGAGGTGGGTGAATTCTGTGGTGAGAGAGGAGTGGACAGCGGAGGTGTTTGATGTTGAGTTACTGAGATATTCAAATATCGAGGAAGAAATGGTAGAGATGTTGCATATAGGGATGTCTTGTGTGGTGAGGGTGCCAGAACGGAGACCAAAAATGCAAGATGTTGTGAGGATGTTGGGGGAAGTTCGTAAGGTGAATACTGGAACCCAATCATCCACAGAAGGTTCCACCCCGACCCCACAAGCAATTACTGAGGCATCTTCTTCGTCTGTTCCACAATAA 1896 0.4525 MGKEMNLLITLSAAFITGAIFGSVGAEPVEDKKALLDFYRNIGQSHPLNWDENSSACNSWRGVFCNSEQSRVIALHLPGAGLSGPIPSNTLSRLSELQTLSLRSNRLTGPFPSDFSELKNLSFVYLQFNKFSGPLPSDFSVWSNLTAVNLSNNSFNESIPSSIGKLTHLTSLVLANNSLSGEIPDIDIPSLEELNLANNHLSGVVPKSLERFPNSAFAGNDNLTTENTPPPAVPIEPPTAPQKMKTTLSEPVLLAIIIGGCVILFLVTAAFMLIRSYQNEHEQVPAVKSKKKEESLKKEASDETESQDKNKIVFFEGRRLAFDLEDLLRSSAEVLGKGSFGTAYKAALDDVTTVVVKRLKEVVVGKREFEQQMEVVGRIRHDNVAPLRAYYYSKEEKLMVYDYFEQGSVSAMLHGRKGEGRVSLDWDSRMRIAIGAARGMAHIHTQHGGKLVHGNLKASNVFLNSQGYGCVSDAGLATLTSSVPLPAQRTGGYRAPEVTDIRKASHAADVYSFGVLVLELLTGKSPIHATGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLHIGMSCVVRVPERRPKMQDVVRMLGEVRKVNTGTQSSTEGSTPTPQAITEASSSSVPQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01088 631 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 404 611 - -
Accr3g01088 631 Gene3D Transferase(Phosphotransferase) domain 1 404 619 - -
Accr3g01088 631 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Accr3g01088 631 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Accr3g01088 631 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Accr3g01088 631 SUPERFAMILY Protein kinase-like (PK-like) 332 597 IPR011009 -
Accr3g01088 631 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Accr3g01088 631 SUPERFAMILY L domain-like 43 214 - -
Accr3g01088 631 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01088 631 Pfam Protein tyrosine and serine/threonine kinase 333 597 IPR001245 GO:0004672|GO:0006468
Accr3g01088 631 MobiDBLite consensus disorder prediction 284 304 - -
Accr3g01088 631 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Accr3g01088 631 Gene3D Phosphorylase Kinase; domain 1 293 403 - -
Accr3g01088 631 PANTHER OS05G0588300 PROTEIN 10 610 - -
Accr3g01088 631 FunFam pollen receptor-like kinase 1 298 403 - -
Accr3g01088 631 MobiDBLite consensus disorder prediction 283 304 - -
Accr3g01088 631 MobiDBLite consensus disorder prediction 602 631 - -
Accr3g01088 631 Gene3D Ribonuclease Inhibitor 143 230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01088 Accr-Chr3 12235742 12237947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01088 20 630 Receptor kinase-like Gene Family AT4G23740 53.600 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr3g01088 PK_Tyr_Ser-Thr 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01088 - - aprc:113851984 852.432