Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01077 ATGGTGGCGTCCAAACTATCATCCTACGAGGAGAGTCGCCGCAAACGAATGGAGGAGAACAAGAAGCGAATCGAAGCCCTCAATTTGACCCAGCTTTCTCTAGCCCTCCGAAATTCCCCTTCTCCCAAACCCTCTCCTATGAAGCACACCAAATCTCGCTCAACGGAAAGAATGCTTGTTGCTGTAAGGAGGTCTGGTCGGGTGGCAAACATGGTTGCTCCTGTCTACAAAGAAGTGCTTATTGATCGTGTGGCAATACCTAGAAGGGTTTATGGGACCAAAAGAAATTTATCAAACTTCGCACACGCTTCAGAGGAGGCCAGAGAGGAAGCTTTTGAAAAAGCAGAGAAGTTACTCGCGGATTTAGAAACTGAATATCCGACATTCATAAAGTCAATGCTTCCGTCACATGTAAGCGGGGGATTTTGGCTGGGTCTTTCAGTCCAGTTCTGCAAGACTCATCTTCCAAAGCGGGACGAAATGATTACTTTGATTGATGAAGAGGGGGATGAGTATCCCACGGTATATTTGGCTCGTAAAACTGGACTCAGCGGTGGATGGAAGGGTTTTGCCGTTGCTCATAACCTAGCTGATGGGGACGCCTTAGTTTTTCAGCTAATCAGAACTACAGCATTTAAGGTGCACATTATTAGAGTGAAGAGTCCTACTCCTACAGAGAGCAATTAG 687 0.4643 MVASKLSSYEESRRKRMEENKKRIEALNLTQLSLALRNSPSPKPSPMKHTKSRSTERMLVAVRRSGRVANMVAPVYKEVLIDRVAIPRRVYGTKRNLSNFAHASEEAREEAFEKAEKLLADLETEYPTFIKSMLPSHVSGGFWLGLSVQFCKTHLPKRDEMITLIDEEGDEYPTVYLARKTGLSGGWKGFAVAHNLADGDALVFQLIRTTAFKVHIIRVKSPTPTESN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01077 228 Coils Coil 105 125 - -
Accr3g01077 228 SMART B3_2 129 220 IPR003340 GO:0003677
Accr3g01077 228 MobiDBLite consensus disorder prediction 35 56 - -
Accr3g01077 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 29 221 IPR044837 -
Accr3g01077 228 Pfam B3 DNA binding domain 129 218 IPR003340 GO:0003677
Accr3g01077 228 CDD B3_DNA 127 218 IPR003340 GO:0003677
Accr3g01077 228 SUPERFAMILY DNA-binding pseudobarrel domain 123 219 IPR015300 -
Accr3g01077 228 Gene3D - 103 221 IPR015300 -
Accr3g01077 228 ProSiteProfiles B3 DNA-binding domain profile. 129 220 IPR003340 GO:0003677
Accr3g01077 228 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g01077 228 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01077 Accr-Chr3 12116801 12119202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01077 56 221 B3 DNA Binding Superfamily AT5G42700 60.241 1.66e-67 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr3g01077 B3 8.8e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01077 - - qsa:O6P43_018914 298.13