Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01076 ATGTCTGCAAGGAATGAACACCAGACCGTCCCCCTTTCGGTGCTACTGAAGCGGGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTATGCATGGTCAATCCAGCGAGAGCAAAAAAGGCGAAGATTTCACGCTAATAAAGACGGAATGCCAAATGGCGGCGGCAGATGGGGTGTCTACTTATTCTGTTTTTGGGTTATTTGATGGGCATAATGGATCTGCTGCTGCAATTTATGCCAAGGAGAATCTCTTAAATAATGTTTTAAGTGCGGTTCCCACAGAGCTTAACAGAGAGGAGTGGGTGTCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCAGGAACAACTGCAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCTGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTTGAAACTAATGAAGAGGAGAGGGAGCGTATAACTGCTAGTGGCGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTGCACAGGTTGGTCCTTTGAGGTGTTGGCCTGGCGGCTTGTGTCTTTCGAGATCCATCGGTGATATGGATATTGGTGAATATATTGTTCCTGTCCCGTATGTGAAGCAAGTGAAGCTGTCCACAGCTGGAGGCAGGCTTATTATCTGCAGTGATGGTGTTTGGGATGCTTTGACAGCAGAAGCAGCCCTTGATTGTTGTCGTGGCATGGGAGCGGATGATGCAGCATCCCTTCTTGTTAGAGAAGCTTTGCAAGCGAAGGGACTTAGAGATGATACTACCTGCATTATTGTTGATATATTACCACAAGAGAAGCCACCTGCTCCTGTGCAACAACCGAAAAAGGCAGGAAAAATGTTGAAGTCAATGTTTCGAAAAAAGTCCTCTGAATCATCTTCTTGTAATGACAAAGAGTACCAGGAACCAGATGTGGTAGAGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACAAAATACCCGCTCCGCCACATGTTCAAGTTGTTTGTTTGTGCGGTATGTCAAAAGGAGATCAAACCTGGAGAAGGTATTTCAATTCATGCAGGTGTAAAAGTGCGTGACTGGGATGGACCTTTTCTTTGTTTTAGTTGTCAGGAGAAGAAAGAAGCAATGGAAGGGAAAAGAACCTCAGATAGACTTAGCAGTGGAAGTGACTGA 1269 0.446 MSARNEHQTVPLSVLLKRELANEKIEKPEIMHGQSSESKKGEDFTLIKTECQMAAADGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAVPTELNREEWVSALPRALVAGFVKTDKDFQEKGQKSGTTATFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEERERITASGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAALDCCRGMGADDAASLLVREALQAKGLRDDTTCIIVDILPQEKPPAPVQQPKKAGKMLKSMFRKKSSESSSCNDKEYQEPDVVEELYEEGSAMLSERLDTKYPLRHMFKLFVCAVCQKEIKPGEGISIHAGVKVRDWDGPFLCFSCQEKKEAMEGKRTSDRLSSGSD 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01076 422 SMART PP2C_4 21 291 IPR001932 -
Accr3g01076 422 Gene3D - 31 299 IPR036457 -
Accr3g01076 422 PANTHER PROTEIN PHOSPHATASE 31 292 IPR015655 GO:0004722|GO:0006470
Accr3g01076 422 Pfam Protein phosphatase 2C 53 278 IPR001932 -
Accr3g01076 422 SMART PP2C_SIG_2 47 293 IPR001932 -
Accr3g01076 422 CDD PP2Cc 39 293 IPR001932 -
Accr3g01076 422 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Accr3g01076 422 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Accr3g01076 422 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01076 Accr-Chr3 12106271 12112005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01076 1 422 PP2C-type Phosphatase Gene Family AT1G47380 76.869 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01076 - - tcc:18591227 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01076 3 12106271 12112005 Accr4g01056 4 10037649 10041826 CCT
Accr3g01076 3 12106271 12112005 Accr3g01076 3 12106271 12112005 ECH