Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01049 ATGAACAGCGAAGATCTGTTGAAGTCATCCACTTCGGACCACCTGGAAAATCAGATGGAGACGATGATGATGCAACTTCCTGGATTCTCTGGAGCCTACAGCAACAACGACGTCGTTCCCGACGACTTTGCACTGCCTGAGATCTCCCCGGCCGCTACTAGGACGACGGACACCGACATACACGGAACTATGCTGCATTTTTTTGGCAACTCGCCTGTGACGTCGCCGTCATCATTCACAAGCTTACAGTCTGCTACAATTTCCTTCACTAACCCTTCTCCGATGCCACAAGAGCGAGATCCACCGCCATGTGGAGGAAACACGAGCGGTAGAGCAGCGTCGGAGAAAGGTATGTCAATGGGGGCGATGAGGGAGATGATATTCAGGATAGCGGTGATGCAGCCCATACACATAGACCCGGAGTCAGTGAAGCCACCGAAGCGGAGGAACGTGAAGATCTCGAAGGATCCTCAGAGCGTGGCGGCTCGCCACCGCAGAGAGAGGATCAGCGAGAGAATAAGGATACTGCAGAGGCTGGTTCCGGGAGGGACTAAGATGGACACAGCTTCCATGTTAGACGAAGCCATTCACTATGTGAAGTTTCTCAAGAATCAGGTTGAGTCACTCGAACGGGCTGCAGCCAGTAAGCCTACAGGGATAGGATTACCTGCGGCCATGCATACTACTGCATCTTCCTCCCCCTCTTATCTTCCGATCCCATCAAAACCTTACCAATTTCCTCCTCAAAATGTTCCGCATTACGGACATGATGCATAA 777 0.5187 MNSEDLLKSSTSDHLENQMETMMMQLPGFSGAYSNNDVVPDDFALPEISPAATRTTDTDIHGTMLHFFGNSPVTSPSSFTSLQSATISFTNPSPMPQERDPPPCGGNTSGRAASEKGMSMGAMREMIFRIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKNQVESLERAAASKPTGIGLPAAMHTTASSSPSYLPIPSKPYQFPPQNVPHYGHDA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01049 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Accr3g01049 258 FunFam BHLH transcription factor 156 219 - -
Accr3g01049 258 Gene3D - 152 218 IPR036638 GO:0046983
Accr3g01049 258 MobiDBLite consensus disorder prediction 229 258 - -
Accr3g01049 258 SMART finulus 159 208 IPR011598 GO:0046983
Accr3g01049 258 Coils Coil 192 212 - -
Accr3g01049 258 MobiDBLite consensus disorder prediction 86 114 - -
Accr3g01049 258 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 66 234 IPR045843 GO:0003700|GO:0006355
Accr3g01049 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 212 IPR036638 GO:0046983
Accr3g01049 258 Pfam Helix-loop-helix DNA-binding domain 163 202 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01049 Accr-Chr3 11864225 11865001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01049 101 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.833 3.28e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr3g01049 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01049 - - zju:107419982 241.121