Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01039 ATGAATGCACAGCCTGCCGTCCGACGTATCTCTGAATGCTTCATCAAACCACCCCCTCTGCCCAATGACTCTAACCCCATCTGCTATTTATCTCCCGCCGACATTCTTATGGTGTCCGTTCACTATATCCAGAAAGGTCTCCTCTTCCTTAAGCCTTCTCCACACAATTCTCCCCTTTTCATTGATTCTCTTCTCCGCCGCCTCAAGCGCTCTCTTTCTCTCACCCTCCTCCATTTTTATCCCCTCGCCGGCCGCCTCGTCACCACACTTCACCCCTCCTACTCCTTCTTCGTCGATTGCCACAACAGTGACGGCGCTAAATTTATCTATGCCACTTTAGACATGACCGTCTCCGACATTGTCTCCCCCGTCGATGTCCCTCCCGTTGTCCAATCATTCTTTGACCTTCACAAGGCAGTCAACCACGACGGTCACACCTTGCCTTTGTTATCCGTCCAGGTAACCGAATTGATAGACGGCGTTTTCATCGGCTGTACCATGAACCACTGCCTCGGCGATGGCACTTCCTACTGGAGATTCTTCAACGCCTGGTCCGAAATCTTTCGAGCACTAGAAGCTGATAACGATGACGGTGATTTTATTCCCATCTCACGCCCACCGATTCACATTCGTTGGTTCCCAGAGGGTTGCGGTCCCCTAATCAATCTTCCCTTCAAACATCACGACGAGTTTCTAAGTAGATCAAACCCTCCCCCTCTCAGAGAGAGAATATTCCATTTCACAACAGAATCTATTGCGAAACTGAAAGCAAAGGCCAACCGAGAGTCCAACTCCACCAAGATATCATCCTTCCAGTCATTATCGGCGCTCGTCTGGAGGTGCATAACCCGCGCCCGGAGTCTCCCTCGTGATCAGAGAACAACCTGCAGGTTGGCGGCAAATAACAGATCAAGAATGGAACCTTCGCTGCCCGAAGAGTACTTTGGGAATTCCATCCACGCGGTAGCTACGGAAACGACCTCGCGGGAGTTGTTAGAGCACGACCTTGGATGGGCCGCGTGGAAGATACACATGGCTGTTGCCAACCACGACGATAAAGCAGTGCATGAGTTTATGAAGAAGTGGTTGGAGAGCCCGTTCGTGTATCAACCGGATCGGATGTTTGACCCGTACAGCGTGATGATGGGGAGCTCGCCCAGATTCGACATGTATGGGAACGACTTTGGAATGGGGAAAGCGCTGGCTGTTCGAAGTGGGTACGCCAACAAGTTTGATGGAAAAGTGACGTCATATCCTGGTCGTGAAGGAGGTGGAAGCATTGACTTAGAGATGTGTCTTCCGCCGGCGTTTATGACGGCACTGGAATCCGACGACGAGTTCATCAATTATGTATCTGTGTAA 1362 0.5095 MNAQPAVRRISECFIKPPPLPNDSNPICYLSPADILMVSVHYIQKGLLFLKPSPHNSPLFIDSLLRRLKRSLSLTLLHFYPLAGRLVTTLHPSYSFFVDCHNSDGAKFIYATLDMTVSDIVSPVDVPPVVQSFFDLHKAVNHDGHTLPLLSVQVTELIDGVFIGCTMNHCLGDGTSYWRFFNAWSEIFRALEADNDDGDFIPISRPPIHIRWFPEGCGPLINLPFKHHDEFLSRSNPPPLRERIFHFTTESIAKLKAKANRESNSTKISSFQSLSALVWRCITRARSLPRDQRTTCRLAANNRSRMEPSLPEEYFGNSIHAVATETTSRELLEHDLGWAAWKIHMAVANHDDKAVHEFMKKWLESPFVYQPDRMFDPYSVMMGSSPRFDMYGNDFGMGKALAVRSGYANKFDGKVTSYPGREGGGSIDLEMCLPPAFMTALESDDEFINYVSV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01039 453 Gene3D - 226 443 IPR023213 -
Accr3g01039 453 FunFam Tryptamine hydroxycinnamoyl transferase 226 444 - -
Accr3g01039 453 Gene3D - 2 217 IPR023213 -
Accr3g01039 453 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 448 - -
Accr3g01039 453 Pfam Transferase family 28 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01039 Accr-Chr3 11751141 11752502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01039 21 442 Monolignol Biosynthesis Gene Families AT5G48930 27.790 2.24e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01039 - - gmx:100787228 647.121