Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01038 ATGAATTCACCCTCTTCCGTCCGACGTATCTCTGAATGCTTCATCAAACCACCGATTCCATCCAATGACTCTAACCCCGCCATCTGCTATCTCTCTCCCTGGGACATTCTTATGTTGTCCTCTCACTACATCCAGAAAGGCCTCCTCTTCCTCAAGCCTTCTCCTCACAATCATCCCCTTTTCATTGATTCTCTCCTCAACCGCCTCAAGCGCTCTCTTTCTCTCACCCTCCTCCACTTTTATCCCCTTACCGGCCGCCTTGTCACCACACCTCTTCCCTCCTACTCCGTCTTCGTCGATTGCCACAACAGTGACGGCGCTAGATTTATCTACGCCACTTTAGACATGACCGTCTCCCACATCCTCTCCCCCGTTGATGTCCCCTCCGTCGCCCAGTCATTCTTTGACCATGATAGGGCAGTCAACCACGACGGCCACACCTTGCCTTTGTTGTCAGTCCAGGTCACCGAATTGATAGACGGCGTTTTCATTGGCTGTTCCATGAACCACTGCCTCGCCGACGGCACTTCCTACTGGAAATTCTTCAACGCCTGGTCCGAAATCTTTCGAGCACTAGAAGCTGATAACAATGACGGTGATTTAATTCCCATCTCACGCCCACCGATTCACAATCGTTGGTTCCCGGAGGGATGCGGTCCACTCATCCGCCTTCCCTTCAAACATCATGACGAGTTCATAAGCAGATTGGAAGCACCCGTTCTTAGAGAGAGAATATTCCATTTCACGGCAGAGTCTATTGCCAAACTGAAAGCAAAGGCCAACCAAGAGTCCAACACCACCAAGATATCATCCTTCCAATCATTATCCGCGCTCGTCTGGAGGTGCATAACACGTGCCCGGAGTCATCCCTGTGATCAGAGAACAAGCTGCAGATTGGCGGCTAATAACAGATCAAGAATGGAACCTTCGCTGCCCGAAGAGTACTTTGGGAATTTAATCTACGTGGTGGCTACGGAAACGACGTCGGGGGAGTTGCTAGAGCACGACCTTGGATGGGCCGCGTGGAAGATACACATGGCTGTTGCCAACCACGACGTTAAAGCAGTGCGCGAGTTTGTTAAGAAGTGGTTGGAGAGGCCGATGGTGATTCAACCGGGTCGGTTCTTTGACCCGAGCAGCGTGATGATAGGGAGCTCTCCCAGATTTGACATGTATGGGAACGACTTTGGAATGGGGAAAGCGTTGGCTGTCCGAAGTGGGTACGCCAACAAGTTTGATGGCAAAGTGACGTCGTATCCGGGTCGTGAAGGAGGCGGAACCATTGATTTGGAGATGTGTCTTCCGCCGGCGGTGATGGCGGCGCTGGAATCCGACAACGAGTTCATGAATTCTGTATCTCTGCAAACTGTTTCCACTTTTTAA 1383 0.5134 MNSPSSVRRISECFIKPPIPSNDSNPAICYLSPWDILMLSSHYIQKGLLFLKPSPHNHPLFIDSLLNRLKRSLSLTLLHFYPLTGRLVTTPLPSYSVFVDCHNSDGARFIYATLDMTVSHILSPVDVPSVAQSFFDHDRAVNHDGHTLPLLSVQVTELIDGVFIGCSMNHCLADGTSYWKFFNAWSEIFRALEADNNDGDLIPISRPPIHNRWFPEGCGPLIRLPFKHHDEFISRLEAPVLRERIFHFTAESIAKLKAKANQESNTTKISSFQSLSALVWRCITRARSHPCDQRTSCRLAANNRSRMEPSLPEEYFGNLIYVVATETTSGELLEHDLGWAAWKIHMAVANHDVKAVREFVKKWLERPMVIQPGRFFDPSSVMIGSSPRFDMYGNDFGMGKALAVRSGYANKFDGKVTSYPGREGGGTIDLEMCLPPAVMAALESDNEFMNSVSLQTVSTF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01038 460 Gene3D - 2 218 IPR023213 -
Accr3g01038 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 450 - -
Accr3g01038 460 Gene3D - 233 444 IPR023213 -
Accr3g01038 460 FunFam Tryptamine hydroxycinnamoyl transferase 227 446 - -
Accr3g01038 460 Pfam Transferase family 10 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01038 Accr-Chr3 11741405 11742787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01038 69 443 Monolignol Biosynthesis Gene Families AT5G48930 27.431 3.83e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01038 - - gmx:100787228 662.144