Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01030 ATGGGAAGCATGAAGGTTCATCACTTGGCACGTGCACTGTGGGAACACGATCCCTCCCCCTCCCTCGGCTGCAAACGCCTCCGTCCCCTCGCCCCCAAGCTCCCCTCCTCCCCCACCACCCCTTTCGACCTCAAGACCTTCATCCGCCCCGAAAGTGGCCCCCGCAAACTCTCCGACGATCCTCCCAGAGACCCACCCCAGGTGGAAACGCACCCGGGGGGGACGAGGTGGAATCCGACGCAGGAGCAGATAGGGATATTGGAGATGCGGTACCGAGGTGGGATGAGAACCCCGAACGCTCAGCAGATAGAGCAGATCACGGCTCAGCTAGCCAGGTATGGCAAGATTGAGGGCAAGAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAGAAGCAGAAACGAAACAGTCTTCGCCTCTCTCACAGTCCCAGATCCACTACTACTTCTGCTATAACTTTTGACGCAACCCTGGGTGAAGTAGTAGGCACAGAGGAGGATAGTCCGTACAAGAAGAAGTGCAGGAGCTGGACATTTGAGGGCTTTCAGGAACAAAGTGGGTCGTGTAATAAAGAGCAACAACATACAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGA 636 0.5566 MGSMKVHHLARALWEHDPSPSLGCKRLRPLAPKLPSSPTTPFDLKTFIRPESGPRKLSDDPPRDPPQVETHPGGTRWNPTQEQIGILEMRYRGGMRTPNAQQIEQITAQLARYGKIEGKNVFYWFQNHKARERQKQKRNSLRLSHSPRSTTTSAITFDATLGEVVGTEEDSPYKKKCRSWTFEGFQEQSGSCNKEQQHTTLELFPLHPEGR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01030 211 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 211 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Accr3g01030 211 CDD homeodomain 75 136 IPR001356 GO:0003677
Accr3g01030 211 MobiDBLite consensus disorder prediction 27 82 - -
Accr3g01030 211 Pfam Homeodomain 75 134 IPR001356 GO:0003677
Accr3g01030 211 SUPERFAMILY Homeodomain-like 70 141 IPR009057 -
Accr3g01030 211 Gene3D - 75 140 - -
Accr3g01030 211 ProSiteProfiles 'Homeobox' domain profile. 70 135 IPR001356 GO:0003677
Accr3g01030 211 FunFam WUSCHEL-related homeobox 4 74 141 - -
Accr3g01030 211 SMART HOX_1 72 139 IPR001356 GO:0003677
Accr3g01030 211 MobiDBLite consensus disorder prediction 49 66 - -
Accr3g01030 211 MobiDBLite consensus disorder prediction 188 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01030 Accr-Chr3 11595963 11596803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01030 4 161 Wox Gene Family AT1G46480 61.582 2.01e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr3g01030 Homeodomain 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01030 - - tcc:18591159 319.701