Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01022 ATGCCCACTTCTTTCTGCAACTCTTGCCTTGGAATCTTTCAATTGAAAAGCAGCTTTGAGGAGCAGACAAAGATGAACAAGGTTGCTCCAAAAATTCTAGTTTCAACTTTGTACCTCCTCATATTGTCCTTTCCTGTCCAAACTCTGACACATGTTGCTGATACAGACAACAGTCATAGTGGTGAAGGTGAGGTTTTCAGCAAAAGCTGCAACAATGAATCCCCCTCAATATCCTTCTCTTCCTCATGTCAAAAATCAAAAAGAACTGAAGTATCTCAAGTTTTACCTCTCCAAACAGATGGTTTGGTATTTGCAGATCAGAGACTCGAAGTTGTATACCCAGTGATCCAAAAATTCAAGTCCAGCATCACTTTTGATCCATTAGGCGTCACCAAATCATGGGTTGGTTCCGATATTTGCACCTACAAAGGTTTCCATTGTGATAACCCCCCAGATAACACTTCAGCCATTGCTGTGGCCTCCATTGATTTCAATGGATTTCAACTTGGAGCTCCAACACTGGATGGCTTCATCGATCAGCTTCCTGATATTGCTCTGTTCCATGCAAATTCCAACAATTTTAGAGGCACCATCTCCACCAAAATCTCCAAGCTCTCTTATCTTTATGAGCTTGATGTAAGCAACAATCAGCTATCTGGTCCATTTCCCATGGCTGTGTTGGGCATGAACACCCTAACATTCTTGGACCTTCGCTTCAACTTGTTCTCTGGGCAAGTCCCTCCTCAGATATTCACCCAGAATCTCGATGTCCTCTTCATCAACAACAATGACTTCACTCAGAGCTTGCCTGATAACCTAGGAAGCACTCATATTCTTTATCTCACCTTAGCCAACAACAAATTCATGGGTCCTATACCTAGAAGCCTCCCTAAAGCTTTGTCCACTCTCACTGAGGTGCTATTCCTGAACAACCAGTTAACAGGTTGTATCCCACATGAGATCGGGCTACTTAAAGAGGCTAGAGTGTTTGATGCTGGGAACAACCAGTTAACAGGTCCATTGCCTATGTCTTTGGGTTGCCTTGAGCAGTTGCAACTTCTCAATTTGGCAGGACCTTTGTGTAGGAGCTTAATTCAGCGAGGGGTTCTTGATATTAGGAACAATTGCATTCCTGATCTTCCATTCCAGAGATCAATGATTGAGTGTGCAGATTTCTTTGCGCACCCTAGATTTTGTTCCCACATGTGGTTTCATAGTTTCATTCCTTGTAAGTTTTCTTTCCACAAGTCTTCAGTCTCTGCCATTCCTAAGATAGCTCCTTCTTCTCCTTGA 1293 0.4285 MPTSFCNSCLGIFQLKSSFEEQTKMNKVAPKILVSTLYLLILSFPVQTLTHVADTDNSHSGEGEVFSKSCNNESPSISFSSSCQKSKRTEVSQVLPLQTDGLVFADQRLEVVYPVIQKFKSSITFDPLGVTKSWVGSDICTYKGFHCDNPPDNTSAIAVASIDFNGFQLGAPTLDGFIDQLPDIALFHANSNNFRGTISTKISKLSYLYELDVSNNQLSGPFPMAVLGMNTLTFLDLRFNLFSGQVPPQIFTQNLDVLFINNNDFTQSLPDNLGSTHILYLTLANNKFMGPIPRSLPKALSTLTEVLFLNNQLTGCIPHEIGLLKEARVFDAGNNQLTGPLPMSLGCLEQLQLLNLAGPLCRSLIQRGVLDIRNNCIPDLPFQRSMIECADFFAHPRFCSHMWFHSFIPCKFSFHKSSVSAIPKIAPSSP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01022 430 Pfam Leucine rich repeat N-terminal domain 117 148 IPR013210 -
Accr3g01022 430 Gene3D Ribonuclease Inhibitor 114 275 IPR032675 -
Accr3g01022 430 Gene3D Ribonuclease Inhibitor 276 377 IPR032675 -
Accr3g01022 430 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 74 358 - -
Accr3g01022 430 SUPERFAMILY L domain-like 118 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01022 Accr-Chr3 11512384 11513769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01022 102 396 Leucine-rich Repeat extension Gene Families AT3G24480 39.571 7.79e-72 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01022 - - gmx:100808707 523.472